RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 USP17L6PQ6QN14 398 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 POTEEQ6S8J3 1075 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 NEK8Q86SG6 692 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 FAM43AQ8N2R8 423 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 LINC00301Q8NCQ3 95 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 KCNG4Q8TDN1 519 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 TBCKQ8TEA7 893 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 SMCR8Q8TEV9 937 aaPredicted RBP14.89□□□□□ -0.03
CPNE3-205ENST00000522240 LEO1Q8WVC0 666 aaPredicted RBP14.89□□□□□ -0.03
CPNE3-205ENST00000522240 ABHD8Q96I13 439 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 SPATA32Q96LK8 384 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 NAP1L4Q99733 375 aaKnown RBP14.89□□□□□ -0.03
CPNE3-205ENST00000522240 PTPN18Q99952 460 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.89□□□□□ -0.03
CPNE3-205ENST00000522240 TMEM260Q9NX78 707 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 MORF4L1Q9UBU8 362 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 RCOR1Q9UKL0 485 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 SREBF1P36956 1147 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 NOGQ13253 232 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 PLS1Q14651 629 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 SF3A1Q15459 793 aaKnown RBP14.88□□□□□ -0.03
CPNE3-205ENST00000522240 INF2Q27J81 1249 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 MOXD1Q6UVY6 613 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 SHCBP1Q8NEM2 672 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 PAGR1Q9BTK6 254 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 FTOQ9C0B1 505 aaKnown RBP eCLIP14.88□□□□□ -0.03
CPNE3-205ENST00000522240 HOMER2Q9NSB8 354 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 TFIP11Q9UBB9 837 aaKnown RBP14.88□□□□□ -0.03
CPNE3-205ENST00000522240 RBPJLQ9UBG7 517 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 RIPK3Q9Y572 518 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 CLIC4Q9Y696 253 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 FRMPD4Q14CM0 1322 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 ADGRA2Q96PE1 1338 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 MYH7BA7E2Y1 1941 aa14.88□□□□□ -0.03
CPNE3-205ENST00000522240 IGF2BP3O00425 579 aaKnown RBP eCLIP14.87□□□□□ -0.03
CPNE3-205ENST00000522240 CA12O43570 354 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 CYP2C8P10632 490 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 GCFC2P16383 781 aaKnown RBP14.87□□□□□ -0.03
CPNE3-205ENST00000522240 ERVK-9P63128 1117 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 ERVK-24P63145 666 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 SLC39A14Q15043 492 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 STK38Q15208 465 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 PTPAQ15257 358 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 IFNL1Q8IU54 200 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 CRYGNQ8WXF5 182 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 MOV10L1Q9BXT6 1211 aaKnown RBP14.87□□□□□ -0.03
CPNE3-205ENST00000522240 GDPD2Q9HCC8 539 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 PCDHB6Q9Y5E3 794 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 PFASO15067 1338 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 RPTORQ8N122 1335 aa14.87□□□□□ -0.03
CPNE3-205ENST00000522240 SPTLC2O15270 562 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 PPP6R2O75170 966 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 HOXA13P31271 388 aaPredicted RBP14.86□□□□□ -0.03
CPNE3-205ENST00000522240 TM4SF4P48230 202 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 USP11P51784 963 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 CCNA1P78396 465 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 FAM110CQ1W6H9 321 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 PPP4R3AQ6IN85 833 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 SLC30A10Q6XR72 485 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 RNF207Q6ZRF8 634 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 PGBD1Q96JS3 809 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 TXNRD2Q9NNW7 524 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 LMBRD1Q9NUN5 540 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 ZNF236Q9UL36 1845 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 LCTP09848 1927 aa14.86□□□□□ -0.03
CPNE3-205ENST00000522240 LAD1O00515 517 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 WNT7AO00755 349 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 CYP3A4P08684 503 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 RPS6P62753 249 aaKnown RBP14.85□□□□□ -0.03
CPNE3-205ENST00000522240 ARHGAP4P98171 946 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 ATP2C1P98194 919 aaPredicted RBP14.85□□□□□ -0.03
CPNE3-205ENST00000522240 CEBPZQ03701 1054 aaKnown RBP14.85□□□□□ -0.03
CPNE3-205ENST00000522240 LETM2Q2VYF4 491 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 CYP4F22Q6NT55 531 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 NSMFQ6X4W1 530 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
CPNE3-205ENST00000522240 SYTL5Q8TDW5 730 aaPredicted RBP14.85□□□□□ -0.03
CPNE3-205ENST00000522240 TBC1D5Q92609 795 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 MROH8Q9H579 483 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 A1CFQ9NQ94 594 aaKnown RBP14.85□□□□□ -0.03
CPNE3-205ENST00000522240 CYP39A1Q9NYL5 469 aa14.85□□□□□ -0.03
CPNE3-205ENST00000522240 CYP3A7-CYP3A51PA0A087WV96 503 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 ERCC3P19447 782 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 ATP2B1P20020 1258 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 CYP3A7P24462 503 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 CIITAP33076 1130 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 UBE2HP62256 183 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 TAF1CQ15572 869 aaPredicted RBP14.84□□□□□ -0.03
CPNE3-205ENST00000522240 FCHSD1Q86WN1 690 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 NCAPG2Q86XI2 1143 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 GPRC5AQ8NFJ5 357 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 MBOAT7Q96N66 472 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 COL20A1Q9P218 1284 aa14.84□□□□□ -0.03
CPNE3-205ENST00000522240 PLXNB2O15031 1838 aa14.83□□□□□ -0.04
CPNE3-205ENST00000522240 EDIL3O43854 480 aa14.83□□□□□ -0.04
CPNE3-205ENST00000522240 NEMFO60524 1076 aa14.83□□□□□ -0.04
CPNE3-205ENST00000522240 CCNT1O60563 726 aaKnown RBP14.83□□□□□ -0.04
CPNE3-205ENST00000522240 PRPF40AO75400 957 aaKnown RBP14.83□□□□□ -0.04
CPNE3-205ENST00000522240 ALDH1A1P00352 501 aa14.83□□□□□ -0.04
CPNE3-205ENST00000522240 MCM7P33993 719 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms