RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 RASSF7Q02833 373 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 CFAP157Q5JU67 520 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 FAM178BQ8IXR5 827 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 PSMD1Q99460 953 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 ADGRG1Q9Y653 693 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 SOS2Q07890 1332 aaPredicted RBP15.15■□□□□ 0.02
SYNPO-205ENST00000522122 APBA1Q02410 837 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 GUCY2DQ02846 1103 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 WDR24Q96S15 920 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 ABHD10Q9NUJ1 306 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 CDC25AP30304 524 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
SYNPO-205ENST00000522122 PTPROQ16827 1216 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 SPATS2Q86XZ4 545 aaKnown RBP15.14■□□□□ 0.01
SYNPO-205ENST00000522122 ST7Q9NRC1 585 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 FAM184BQ9ULE4 1060 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 SF3A3Q12874 501 aaKnown RBP eCLIP15.14■□□□□ 0.01
SYNPO-205ENST00000522122 EXOC3L4Q17RC7 722 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 KCND1Q9NSA2 647 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 HOMER3Q9NSC5 361 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 LARSQ9P2J5 1176 aaKnown RBP15.14■□□□□ 0.01
SYNPO-205ENST00000522122 FBXO2Q9UK22 296 aaPredicted RBP15.14■□□□□ 0.01
SYNPO-205ENST00000522122 ANTXR2P58335 489 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 TTLL11Q8NHH1 800 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 ISCA1Q9BUE6 129 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.14■□□□□ 0.01
SYNPO-205ENST00000522122 RIMS1Q86UR5 1692 aaKnown RBP15.14■□□□□ 0.01
SYNPO-205ENST00000522122 CACNA2D3Q8IZS8 1091 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 KIFC2Q96AC6 838 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 DPH5Q9H2P9 285 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 PICK1Q9NRD5 415 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 KCNG1Q9UIX4 513 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 ADAM21Q9UKJ8 722 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 PCDHA1Q9Y5I3 950 aa15.14■□□□□ 0.01
SYNPO-205ENST00000522122 CCDC160A6NGH7 325 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 ZBED4O75132 1171 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 CD19P15391 556 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 MIER3Q7Z3K6 550 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 FBXO11Q86XK2 927 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 CCDC170Q8IYT3 715 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 KIAA1024Q9UPX6 916 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 VGLL3A8MV65 326 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 TNNI1P19237 187 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 ALDH1B1P30837 517 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 FKBP3Q00688 224 aaKnown RBP15.13■□□□□ 0.01
SYNPO-205ENST00000522122 MAN2A1Q16706 1144 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 BZW2Q9Y6E2 419 aaKnown RBP15.13■□□□□ 0.01
SYNPO-205ENST00000522122 H0YIN7 160 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 H2AFXP16104 143 aaPredicted RBP15.13■□□□□ 0.01
SYNPO-205ENST00000522122 ARL1P40616 181 aaPredicted RBP15.13■□□□□ 0.01
SYNPO-205ENST00000522122 IRX5P78411 483 aaPredicted RBP15.13■□□□□ 0.01
SYNPO-205ENST00000522122 NEDD9Q14511 834 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 HPS5Q9UPZ3 1129 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 A0A1B0GTH6 734 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 FOXN1O15353 648 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 RASGRF1Q13972 1273 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 PPP1R21Q6ZMI0 780 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 MB21D1Q8N884 522 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 CCDC110Q8TBZ0 833 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 RIC8AQ9NPQ8 531 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 CAPN7Q9Y6W3 813 aa15.13■□□□□ 0.01
SYNPO-205ENST00000522122 FAM170AA1A519 330 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 BUB1BO60566 1050 aaPredicted RBP15.12■□□□□ 0.01
SYNPO-205ENST00000522122 SSX2IPQ9Y2D8 614 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 FOSP01100 380 aaPredicted RBP15.12■□□□□ 0.01
SYNPO-205ENST00000522122 CCNE1P24864 410 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 PCK1P35558 622 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 ZBED6P86452 979 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 MAP7D1Q3KQU3 841 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 CERKLQ49MI3 558 aaPredicted RBP15.12■□□□□ 0.01
SYNPO-205ENST00000522122 ARL6IP4Q66PJ3 421 aaKnown RBP15.12■□□□□ 0.01
SYNPO-205ENST00000522122 EFCAB13Q8IY85 973 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 GJA10Q969M2 543 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 AGXT2Q9BYV1 514 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 PABPN1LA6NDY0 278 aaKnown RBP15.12■□□□□ 0.01
SYNPO-205ENST00000522122 N4BP1O75113 896 aaKnown RBP15.12■□□□□ 0.01
SYNPO-205ENST00000522122 CIB2O75838 187 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 STX2P32856 288 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 GPATCH4Q5T3I0 446 aaKnown RBP15.12■□□□□ 0.01
SYNPO-205ENST00000522122 FNBP4Q8N3X1 1017 aaPredicted RBP15.12■□□□□ 0.01
SYNPO-205ENST00000522122 LARGE2Q8N3Y3 721 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 PLA2G12BQ9BX93 195 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 BAIAP2L1Q9UHR4 511 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 ERVV-1B6SEH8 477 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 CYP4A11Q02928 519 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 SLFN13Q68D06 897 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 NLRX1Q86UT6 975 aa15.12■□□□□ 0.01
SYNPO-205ENST00000522122 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 DLGAP5Q15398 846 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 GKAP1Q5VSY0 366 aaPredicted RBP15.11■□□□□ 0.01
SYNPO-205ENST00000522122 APBB1IPQ7Z5R6 666 aaPredicted RBP15.11■□□□□ 0.01
SYNPO-205ENST00000522122 TMOD4Q9NZQ9 345 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 EPHB4P54760 987 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 ASPRV1Q53RT3 343 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 ANKRD42Q8N9B4 389 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 OXER1Q8TDS5 423 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 TBCKQ8TEA7 893 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 MCUR1Q96AQ8 359 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 KRT12Q99456 494 aa15.11■□□□□ 0.01
SYNPO-205ENST00000522122 EPC1Q9H2F5 836 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms