RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 P2RX7Q99572 595 aaKnown RBP20.77■□□□□ 0.91
TRAPPC9-210ENST00000521667 C7orf25Q9BPX7 421 aa20.77■□□□□ 0.91
TRAPPC9-210ENST00000521667 GLIS2Q9BZE0 524 aaPredicted RBP20.77■□□□□ 0.91
TRAPPC9-210ENST00000521667 TRIM9Q9C026 710 aa20.77■□□□□ 0.91
TRAPPC9-210ENST00000521667 GDAQ9Y2T3 454 aa20.77■□□□□ 0.91
TRAPPC9-210ENST00000521667 RHOBTB3O94955 611 aa20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 YBX3P16989 372 aaKnown RBP eCLIP20.76■□□□□ 0.915e-6■■■□□ 19.1
TRAPPC9-210ENST00000521667 TAL1P17542 331 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 PAK1Q13153 545 aa20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 TBC1D10BQ4KMP7 808 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 VSTM4Q8IW00 320 aa20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 TEX2Q8IWB9 1127 aa20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 SNX29Q8TEQ0 813 aa20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 CDK5RAP3Q96JB5 506 aa20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 RANBP17Q9H2T7 1088 aaKnown RBP20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 INTS13Q9NVM9 706 aa20.76■□□□□ 0.91
TRAPPC9-210ENST00000521667 CDKAL1Q5VV42 579 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 KIFC2Q96AC6 838 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 HACL1Q9UJ83 578 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 FEM1BQ9UK73 627 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 PCDHA12Q9UN75 941 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 PIK3CDO00329 1044 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 SREBF1P36956 1147 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 CCZ1BP86790 482 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 CCZ1P86791 482 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 KIF4BQ2VIQ3 1234 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 CCDC84Q86UT8 332 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 CCDC47Q96A33 483 aaKnown RBP20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 KCNMB3Q9NPA1 279 aa20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 ASTN2O75129 1339 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC9-210ENST00000521667 SBF1O95248 1867 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 SKILP12757 684 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 PRCPP42785 496 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 SV2BQ7L1I2 683 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 ADSSL1Q8N142 457 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 NELFBQ8WX92 580 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 FEZ1Q99689 392 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 ZNF341Q9BYN7 854 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 GINM1Q9NU53 330 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 BLOC1S4Q9NUP1 217 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 MYH7BA7E2Y1 1941 aa20.74■□□□□ 0.91
TRAPPC9-210ENST00000521667 LMNB1P20700 586 aa20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 SFPQP23246 707 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 TPD52L1Q16890 204 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 TMEM119Q4V9L6 283 aa20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 ARMCX5Q6P1M9 558 aa20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 CCDC174Q6PII3 467 aa20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 GIMAP8Q8ND71 665 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 GJA10Q969M2 543 aa20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 NUDT12Q9BQG2 462 aa20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 DEFB129Q9H1M3 183 aa20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 HOXA13P31271 388 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 ASIC1P78348 528 aa20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 SLFN12Q8IYM2 578 aa20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 LARP4BQ92615 738 aaKnown RBP20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 DICER1Q9UPY3 1922 aaKnown RBP20.73■□□□□ 0.91
TRAPPC9-210ENST00000521667 A0A1B0GTH6 734 aa20.72■□□□□ 0.91
TRAPPC9-210ENST00000521667 CTNND1O60716 968 aaKnown RBP20.72■□□□□ 0.91
TRAPPC9-210ENST00000521667 Q4G0T1 1027 aa20.72■□□□□ 0.91
TRAPPC9-210ENST00000521667 DNTTIP2Q5QJE6 756 aaKnown RBP20.72■□□□□ 0.91
TRAPPC9-210ENST00000521667 RAD54LQ92698 747 aa20.72■□□□□ 0.91
TRAPPC9-210ENST00000521667 GTPBP4Q9BZE4 634 aaKnown RBP20.72■□□□□ 0.91
TRAPPC9-210ENST00000521667 MAPK8IP1Q9UQF2 711 aa20.72■□□□□ 0.91
TRAPPC9-210ENST00000521667 TBX3O15119 743 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 STIM1Q13586 685 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 APTXQ7Z2E3 356 aaKnown RBP20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 CTAGE1Q96RT6 745 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 EXOC1Q9NV70 894 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 KDM3AQ9Y4C1 1321 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 CIITAP33076 1130 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 PDE4DQ08499 809 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 MCM6Q14566 821 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 NR1I3Q14994 352 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 PRR16Q569H4 304 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 ETNPPLQ8TBG4 499 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 FBXO28Q9NVF7 368 aa20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 MRPL11Q9Y3B7 192 aaKnown RBP20.71■□□□□ 0.91
TRAPPC9-210ENST00000521667 H7C1D1 291 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 COBLO75128 1261 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 CYP3A4P08684 503 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 HYIQ5T013 277 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 LPAR1Q92633 364 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 LRRC27Q9C0I9 530 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 KIAA1683Q9H0B3 1180 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 GCOM1H8Y6P7 765 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 PSMA7O14818 248 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 WDR46O15213 610 aaKnown RBP20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 SLC26A4O43511 780 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 CFBP00751 764 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 POLR2MP0CAP2 368 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 LENG9Q96B70 501 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 NT5C3AQ9H0P0 336 aa20.7■□□□□ 0.9
TRAPPC9-210ENST00000521667 ABCB11O95342 1321 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 MYMKA6NI61 221 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 FAM86B1E9PN63 330 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 NRDCO43847 1150 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 FAM86B2P0C5J1 330 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 CCT6AP40227 531 aaKnown RBP20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 SPAG1Q07617 926 aa20.69■□□□□ 0.9
TRAPPC9-210ENST00000521667 ECM1Q16610 540 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms