RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ZNF214Q9UL59 606 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 USP15Q9Y4E8 981 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 MYO10Q9HD67 2058 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 PDS5AQ29RF7 1337 aaKnown RBP8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 FANCIQ9NVI1 1328 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 TANC1Q9C0D5 1861 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 TK2O00142 265 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 GRM6O15303 877 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 DYNC1LI2O43237 492 aaPredicted RBP8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 NBNO60934 754 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 BRD1O95696 1058 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 CXCL10P02778 98 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 SMPD1P17405 629 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 STAT3P40763 770 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 CLCN5P51795 746 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 RARSP54136 660 aaKnown RBP8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 TNFAIP2Q03169 654 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 COASYQ13057 564 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 ATP2B3Q16720 1220 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 SPTY2D1Q68D10 685 aaPredicted RBP8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 TBC1D9Q6ZT07 1266 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 ARMCX2Q7L311 632 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 TLK2Q86UE8 772 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 SIAH1Q8IUQ4 282 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 TMEM192Q8IY95 271 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 MAGEB6Q8N7X4 407 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 RETREG2Q8NC44 543 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 RUBCNQ92622 972 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 TSR2Q969E8 191 aaKnown RBP8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 CTAGE1Q96RT6 745 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 RIPK3Q9Y572 518 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 INSL6Q9Y581 213 aa8.88□□□□□ -0.99
CTNNA1-227ENST00000521387 TRIP12Q14669 1992 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 ABHD14A-ACY1A0A1B0GW23 586 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 LGR5O75473 907 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 FLOT1O75955 427 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 LINC00271P0C7V0 271 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 CAMK1Q14012 370 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 SEPT2Q15019 361 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 ABCB5Q2M3G0 1257 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 CNKSR3Q6P9H4 555 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 SKAP1Q86WV1 359 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 FBXO11Q86XK2 927 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 CCDC105Q8IYK2 499 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 KREMEN2Q8NCW0 462 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 SUSD6Q92537 303 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 HAUS7Q99871 368 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 FBXO28Q9NVF7 368 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 TNNQ9UQP3 1299 aa8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 CNOT1A5YKK6 2376 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-227ENST00000521387 IL16Q14005 1332 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 IGF2RP11717 2491 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 GLP2RO95838 553 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 LDHCP07864 332 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 NPR3P17342 541 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 SHMT1P34896 483 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 PPP4CP60510 307 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 TWISTNBQ3B726 338 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 CERKLQ49MI3 558 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 PI16Q6UXB8 463 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 ADGRA1Q86SQ6 560 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 SUMF1Q8NBK3 374 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 PANK1Q8TE04 598 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 SAMD11Q96NU1 681 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 TRIM34Q9BYJ4 488 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 PDGFCQ9NRA1 345 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 AATFQ9NY61 560 aaKnown RBP eCLIP8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 DDX49Q9Y6V7 483 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 PARP14Q460N5 1801 aa8.86□□□□□ -0.99
CTNNA1-227ENST00000521387 VWA5AO00534 786 aa8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 ALDH1L1O75891 902 aa8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 NDUFV1P49821 464 aa8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 EXOSC9Q06265 439 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 TRAF7Q6Q0C0 670 aa8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 NOL8Q76FK4 1167 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 LURAP1LQ8IV03 231 aa8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 SPICE1Q8N0Z3 855 aa8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 DTWD2Q8NBA8 298 aa8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 DHX38Q92620 1227 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 HINFPQ9BQA5 517 aa8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 RALGAPA2Q2PPJ7 1873 aa8.85□□□□□ -0.99
CTNNA1-227ENST00000521387 NBEAQ8NFP9 2946 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 ZEB2O60315 1214 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 ATF7P17544 494 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 GSTO1P78417 241 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 PURAQ00577 322 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 BFSP2Q13515 415 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 MBTPS1Q14703 1052 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 LRRFIP1Q32MZ4 808 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 TAPT1Q6NXT6 567 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 CENPQQ7L2Z9 268 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 ADGRD2Q7Z7M1 963 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 TMC2Q8TDI7 906 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 FRAT1Q92837 279 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 DDX11Q96FC9 970 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 AP5M1Q9H0R1 490 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 HMG20BQ9P0W2 317 aa8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 BARX2Q9UMQ3 279 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-227ENST00000521387 COG6Q9Y2V7 657 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms