RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	DBR1	Q9UK59	544 aa	Known RBP	7.61	□□□□□ -1.19
MSR1-211	ENST00000520846	SMG5	Q9UPR3	1016 aa	Known RBP	7.61	□□□□□ -1.19
MSR1-211	ENST00000520846	SPATC1	Q76KD6	591 aa		7.6	□□□□□ -1.19
MSR1-211	ENST00000520846	MARCH2	Q9P0N8	246 aa		7.6	□□□□□ -1.19
MSR1-211	ENST00000520846	TIMM13	Q9Y5L4	95 aa	Predicted RBP	7.6	□□□□□ -1.19
MSR1-211	ENST00000520846	ZC3H12D	A2A288	527 aa	Known RBP	7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	PRODH	O43272	600 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	MYO1B	O43795	1136 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	DLX3	O60479	287 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	FGFR1	P11362	822 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	RPL11	P62913	178 aa	Known RBP	7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	PRR5	P85299	388 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	KCNA10	Q16322	511 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	WWC2	Q6AWC2	1192 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	NETO2	Q8NC67	525 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	RCBTB1	Q8NDN9	531 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	PLEKHO2	Q8TD55	490 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	SPATA9	Q9BWV2	254 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	HCFC2	Q9Y5Z7	792 aa		7.59	□□□□□ -1.19
MSR1-211	ENST00000520846	TRAV20	A0A0B4J274	112 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	NPIPB6	E9PJ23	425 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	N4BP3	O15049	544 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	PABPC1	P11940	636 aa	Known RBP	7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	CDR1	P51861	262 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	EPHB3	P54753	998 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	SSRP1	Q08945	709 aa	Known RBP	7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	NSMF	Q6X4W1	530 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	LRP10	Q7Z4F1	713 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	LDHD	Q86WU2	507 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	TEX2	Q8IWB9	1127 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	PMFBP1	Q8TBY8	1022 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	MZB1	Q8WU39	189 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	PEX11G	Q96HA9	241 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	DNAJC2	Q99543	621 aa	Known RBP	7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	RXFP1	Q9HBX9	757 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	PFDN2	Q9UHV9	154 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	NUDT5	Q9UKK9	219 aa		7.58	□□□□□ -1.2
MSR1-211	ENST00000520846	C22orf46	C9J442	243 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	NTRK1	P04629	796 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	LCP1	P13796	627 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	BCL6	P41182	706 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	GTF2A2	P52657	109 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	LINC00310	P59036	64 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	ZNF200	P98182	395 aa	Predicted RBP	7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	RASA3	Q14644	834 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	CILP2	Q8IUL8	1156 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	OSBP2	Q969R2	916 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	TOX2	Q96NM4	488 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	DEPDC7	Q96QD5	511 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	PCDHA2	Q9Y5H9	948 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	NPFFR2	Q9Y5X5	522 aa		7.57	□□□□□ -1.2
MSR1-211	ENST00000520846	FAM221B	A6H8Z2	402 aa		7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	ADCY3	O60266	1144 aa		7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	IFRD2	Q12894	506 aa	Predicted RBP	7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	YOD1	Q5VVQ6	348 aa	Predicted RBP	7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	USP53	Q70EK8	1073 aa		7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	CEP68	Q76N32	757 aa		7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	TRMT2B	Q96GJ1	504 aa	Known RBP	7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	SIGLEC10	Q96LC7	697 aa		7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	SNTG2	Q9NY99	539 aa		7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	CNOT6	Q9ULM6	557 aa	Known RBP	7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	PCDHA5	Q9Y5H7	936 aa		7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	IRAK3	Q9Y616	596 aa		7.56	□□□□□ -1.2
MSR1-211	ENST00000520846	DIAPH1	O60610	1272 aa	Known RBP	7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	FPR2	P25090	351 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	NCKAP1L	P55160	1127 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	JAG1	P78504	1218 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	LSAMP	Q13449	338 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	SLC9A5	Q14940	896 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	IGDCC3	Q8IVU1	814 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846		Q8N1Y9	231 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	MKL1	Q969V6	931 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	TSPAN17	Q96FV3	270 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	TMEM169	Q96HH4	297 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	CHAMP1	Q96JM3	812 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	DRC1	Q96MC2	740 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	SRPK1	Q96SB4	655 aa	Known RBP	7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	GPR27	Q9NS67	375 aa		7.55	□□□□□ -1.2
MSR1-211	ENST00000520846	IRS2	Q9Y4H2	1338 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	ZBTB7A	O95365	584 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	CFP	P27918	469 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	TARBP2	Q15633	366 aa	Known RBP	7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	LCE3B	Q5TA77	95 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	MROH9	Q5TGP6	573 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	CIAPIN1	Q6FI81	312 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	NLRP10	Q86W26	655 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	DCP2	Q8IU60	420 aa	Known RBP	7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	RIOX2	Q8IUF8	465 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	LRRC56	Q8IYG6	542 aa	Predicted RBP	7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	DCAF4	Q8WV16	495 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	CDC6	Q99741	560 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	PHF20	Q9BVI0	1012 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	FBXL7	Q9UJT9	491 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	SIT1	Q9Y3P8	196 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846		X6R8D5	127 aa		7.54	□□□□□ -1.2
MSR1-211	ENST00000520846	IRS4	O14654	1257 aa	Predicted RBP	7.53	□□□□□ -1.2
MSR1-211	ENST00000520846	NUAK1	O60285	661 aa		7.53	□□□□□ -1.2
MSR1-211	ENST00000520846	PFKL	P17858	780 aa		7.53	□□□□□ -1.2
MSR1-211	ENST00000520846	SSPN	Q14714	243 aa		7.53	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms