RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 FGBP02675 491 aa22.94■■□□□ 1.26
PABPC1-215ENST00000520804 TXNP10599 105 aaKnown RBP22.94■■□□□ 1.26
PABPC1-215ENST00000520804 TTC22Q5TAA0 569 aa22.94■■□□□ 1.26
PABPC1-215ENST00000520804 SYTL5Q8TDW5 730 aaPredicted RBP22.94■■□□□ 1.26
PABPC1-215ENST00000520804 COPS5Q92905 334 aa22.94■■□□□ 1.26
PABPC1-215ENST00000520804 PBX4Q9BYU1 374 aa22.94■■□□□ 1.26
PABPC1-215ENST00000520804 ZNF576Q9H609 170 aa22.94■■□□□ 1.26
PABPC1-215ENST00000520804 JMJD4Q9H9V9 463 aa22.94■■□□□ 1.26
PABPC1-215ENST00000520804 DHX16O60231 1041 aaKnown RBP22.93■■□□□ 1.26
PABPC1-215ENST00000520804 KPNA6O60684 536 aa22.93■■□□□ 1.26
PABPC1-215ENST00000520804 SUPT20HL2P0C7V6 817 aa22.93■■□□□ 1.26
PABPC1-215ENST00000520804 PBX2P40425 430 aa22.93■■□□□ 1.26
PABPC1-215ENST00000520804 TTLL4Q14679 1199 aa22.93■■□□□ 1.26
PABPC1-215ENST00000520804 IFIT1BQ5T764 474 aaKnown RBP22.93■■□□□ 1.26
PABPC1-215ENST00000520804 MCF2L2Q86YR7 1114 aa22.93■■□□□ 1.26
PABPC1-215ENST00000520804 TAAR1Q96RJ0 339 aa22.93■■□□□ 1.26
PABPC1-215ENST00000520804 MTIF3Q9H2K0 278 aaKnown RBP22.93■■□□□ 1.26
PABPC1-215ENST00000520804 VAT1LQ9HCJ6 419 aa22.93■■□□□ 1.26
PABPC1-215ENST00000520804 TRMT13Q9NUP7 481 aaKnown RBP22.93■■□□□ 1.26
PABPC1-215ENST00000520804 CXXC1Q9P0U4 656 aaPredicted RBP22.93■■□□□ 1.26
PABPC1-215ENST00000520804 COL20A1Q9P218 1284 aa22.93■■□□□ 1.26
PABPC1-215ENST00000520804 ARIH2O95376 493 aa22.92■■□□□ 1.26
PABPC1-215ENST00000520804 SEC23AQ15436 765 aa22.92■■□□□ 1.26
PABPC1-215ENST00000520804 FBXO11Q86XK2 927 aa22.92■■□□□ 1.26
PABPC1-215ENST00000520804 NSUN6Q8TEA1 469 aaKnown RBP22.92■■□□□ 1.26
PABPC1-215ENST00000520804 MRPL11Q9Y3B7 192 aaKnown RBP22.92■■□□□ 1.26
PABPC1-215ENST00000520804 EYSQ5T1H1 3165 aa22.92■■□□□ 1.26
PABPC1-215ENST00000520804 SCN10AQ9Y5Y9 1956 aa22.92■■□□□ 1.26
PABPC1-215ENST00000520804 MYH6P13533 1939 aa22.92■■□□□ 1.26
PABPC1-215ENST00000520804 CYP2C9P11712 490 aa22.91■■□□□ 1.26
PABPC1-215ENST00000520804 NBPF20Q3BBV1 942 aa22.91■■□□□ 1.26
PABPC1-215ENST00000520804 CCDC62Q6P9F0 684 aa22.91■■□□□ 1.26
PABPC1-215ENST00000520804 CYB5R4Q7L1T6 521 aa22.91■■□□□ 1.26
PABPC1-215ENST00000520804 OTOP2Q7RTS6 562 aa22.91■■□□□ 1.26
PABPC1-215ENST00000520804 RPUSD2Q8IZ73 545 aaKnown RBP22.91■■□□□ 1.26
PABPC1-215ENST00000520804 STAG2Q8N3U4 1231 aa22.91■■□□□ 1.26
PABPC1-215ENST00000520804 COL25A1Q9BXS0 654 aaPredicted RBP22.91■■□□□ 1.26
PABPC1-215ENST00000520804 FAM47CQ5HY64 1035 aa22.9■■□□□ 1.26
PABPC1-215ENST00000520804 NFRKBQ6P4R8 1299 aa22.9■■□□□ 1.26
PABPC1-215ENST00000520804 VWCEQ96DN2 955 aa22.9■■□□□ 1.26
PABPC1-215ENST00000520804 SCLYQ96I15 445 aa22.9■■□□□ 1.26
PABPC1-215ENST00000520804 IWS1Q96ST2 819 aa22.9■■□□□ 1.26
PABPC1-215ENST00000520804 RMDN3Q96TC7 470 aa22.9■■□□□ 1.26
PABPC1-215ENST00000520804 RAB30Q15771 203 aa22.89■■□□□ 1.25
PABPC1-215ENST00000520804 STXBP2Q15833 593 aa22.89■■□□□ 1.25
PABPC1-215ENST00000520804 SEPT14Q6ZU15 432 aa22.89■■□□□ 1.25
PABPC1-215ENST00000520804 RUFY2Q8WXA3 655 aa22.89■■□□□ 1.25
PABPC1-215ENST00000520804 AMNQ9BXJ7 453 aa22.89■■□□□ 1.25
PABPC1-215ENST00000520804 KLRF2D3W0D1 207 aa22.88■■□□□ 1.25
PABPC1-215ENST00000520804 CHMLP26374 656 aa22.88■■□□□ 1.25
PABPC1-215ENST00000520804 PTPN11Q06124 597 aaPredicted RBP22.88■■□□□ 1.25
PABPC1-215ENST00000520804 TRDNQ13061 729 aa22.88■■□□□ 1.25
PABPC1-215ENST00000520804 MTMR8Q96EF0 704 aa22.88■■□□□ 1.25
PABPC1-215ENST00000520804 MAD2L2Q9UI95 211 aa22.88■■□□□ 1.25
PABPC1-215ENST00000520804 MSRAQ9UJ68 235 aa22.88■■□□□ 1.25
PABPC1-215ENST00000520804 KIAA1217Q5T5P2 1943 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 PALM3A6NDB9 673 aaPredicted RBP22.87■■□□□ 1.25
PABPC1-215ENST00000520804 OPLAHO14841 1288 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 CFBP00751 764 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 GH1P01241 217 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 PFKMP08237 780 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 CYP21A2P08686 494 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 EIF2AK2P19525 551 aaKnown RBP22.87■■□□□ 1.25
PABPC1-215ENST00000520804 GHRHRQ02643 423 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 PTH1RQ03431 593 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 ARHGAP1Q07960 439 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 LY6KQ17RY6 165 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 ARHGEF16Q5VV41 709 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 PPP1R13LQ8WUF5 828 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 AFG1LQ8WV93 481 aa22.87■■□□□ 1.25
PABPC1-215ENST00000520804 U3KPZ7 1027 aaPredicted RBP22.87■■□□□ 1.25
PABPC1-215ENST00000520804 EIF3JO75822 258 aaKnown RBP22.86■■□□□ 1.25
PABPC1-215ENST00000520804 MMP3P08254 477 aa22.86■■□□□ 1.25
PABPC1-215ENST00000520804 HSD17B4P51659 736 aa22.86■■□□□ 1.25
PABPC1-215ENST00000520804 PXMP2Q9NR77 195 aa22.86■■□□□ 1.25
PABPC1-215ENST00000520804 SLC4A7Q9Y6M7 1214 aa22.86■■□□□ 1.25
PABPC1-215ENST00000520804 GBF1Q92538 1859 aa22.85■■□□□ 1.25
PABPC1-215ENST00000520804 ZBTB5O15062 677 aa22.85■■□□□ 1.25
PABPC1-215ENST00000520804 PPP1R11O60927 126 aaPredicted RBP22.85■■□□□ 1.25
PABPC1-215ENST00000520804 NKX2-4Q9H2Z4 354 aa22.85■■□□□ 1.25
PABPC1-215ENST00000520804 DDX41Q9UJV9 622 aaKnown RBP22.85■■□□□ 1.25
PABPC1-215ENST00000520804 PITPNM1O00562 1244 aa22.84■■□□□ 1.25
PABPC1-215ENST00000520804 NR3C2P08235 984 aa22.84■■□□□ 1.25
PABPC1-215ENST00000520804 RFC2P35250 354 aa22.84■■□□□ 1.25
PABPC1-215ENST00000520804 GRM4Q14833 912 aa22.84■■□□□ 1.25
PABPC1-215ENST00000520804 GAS2L1Q99501 681 aaPredicted RBP22.84■■□□□ 1.25
PABPC1-215ENST00000520804 PRDM12Q9H4Q4 367 aa22.84■■□□□ 1.25
PABPC1-215ENST00000520804 MAP3K20Q9NYL2 800 aaKnown RBP22.84■■□□□ 1.25
PABPC1-215ENST00000520804 YBX2Q9Y2T7 364 aaKnown RBP22.84■■□□□ 1.25
PABPC1-215ENST00000520804 PCDHA1Q9Y5I3 950 aa22.84■■□□□ 1.25
PABPC1-215ENST00000520804 SCN5AQ14524 2016 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 ZBBXA8MT70 800 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 IFIT3O14879 490 aaKnown RBP22.83■■□□□ 1.25
PABPC1-215ENST00000520804 IQCF3P0C7M6 154 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 CHMP4BP1P59074 171 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 SLC35G1Q2M3R5 365 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 CHST3Q7LGC8 479 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 DEFB128Q7Z7B8 93 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 SESTD1Q86VW0 696 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 USP38Q8NB14 1042 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms