RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 RABGGTAQ92696 567 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 PARK7Q99497 189 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 GBP3Q9H0R5 595 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 ACBD3Q9H3P7 528 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 ZCCHC17Q9NP64 241 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 PICK1Q9NRD5 415 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 TOMM22Q9NS69 142 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 FANCLQ9NW38 375 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 RMND1Q9NWS8 449 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 FAM198AQ9UFP1 575 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 GABRQQ9UN88 632 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 ZHX2Q9Y6X8 837 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 ITIH6Q6UXX5 1313 aa9.73□□□□□ -0.85
CTNNA1-223ENST00000520520 MYO5AQ9Y4I1 1855 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 EIF3JO75822 258 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 DDAH1O94760 285 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 GNRH1P01148 92 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 PNMA6AP0CW24 399 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 ELNP15502 786 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 ZNF18P17022 549 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 TXLNAP40222 546 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 PHKA1P46020 1223 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 PRMT2P55345 433 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 FCGRTP55899 365 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 UBXN2AP68543 259 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 SEMA3FQ13275 785 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 BRD3Q15059 726 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 FKBP1CQ5VVH2 108 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 SPATA1Q5VX52 437 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 PI16Q6UXB8 463 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 CATIPQ7Z7H3 387 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 DZIP1Q86YF9 867 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 REXO1L1PQ8IX06 675 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 ZNF654Q8IZM8 581 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 SMCR8Q8TEV9 937 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 AIFM3Q96NN9 605 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 TSPYL1Q9H0U9 437 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 UNC93B1Q9H1C4 597 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 HSD3B7Q9H2F3 369 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 ARFGAP3Q9NP61 516 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 MYO1AQ9UBC5 1043 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 ABCF2Q9UG63 623 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 SUGT1Q9Y2Z0 365 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 SLC4A4Q9Y6R1 1079 aa9.72□□□□□ -0.85
CTNNA1-223ENST00000520520 A0A1B0GTH6 734 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 FAM196BA6NMK8 535 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 POLR2DO15514 142 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 FARP2O94887 1054 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 SLFN14P0C7P3 912 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 RXRAP19793 462 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 TRAPPC10P48553 1259 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 SARSP49591 514 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 MOGSQ13724 837 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 NAA30Q147X3 362 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 RRP12Q5JTH9 1297 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 ISM2Q6H9L7 571 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 TRIM65Q6PJ69 517 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 CRACR2BQ8N4Y2 399 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 NKX2-3Q8TAU0 364 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 U2AF1L4Q8WU68 220 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 CLIC6Q96NY7 704 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 GSDMAQ96QA5 445 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 HTATIP2Q9BUP3 242 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 MRIQ9BWK5 157 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 CARD6Q9BX69 1037 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 EPB41L4AQ9HCS5 686 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 GJB4Q9NTQ9 266 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 SERTAD1Q9UHV2 236 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 ANAPC4Q9UJX5 808 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 KCNH4Q9UQ05 1017 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 MRFAP1Q9Y605 127 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 MYH6P13533 1939 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 ADGRA2Q96PE1 1338 aa9.71□□□□□ -0.86
CTNNA1-223ENST00000520520 MGAMO43451 1857 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 CCDC151A5D8V7 595 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 BTBD18B2RXH4 712 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 TNPO2O14787 897 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 ACTN4O43707 911 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 ADCY3O60266 1144 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 IGSF3O75054 1194 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 ZRANB2O95218 330 aaKnown RBP eCLIP9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 TFRCP02786 760 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 GJB1P08034 283 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 PTPRAP18433 802 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 MCM3P25205 808 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 GJA8P48165 433 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 FLT3LGP49771 235 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 PPARAQ07869 468 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 RASGRF1Q13972 1273 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 NOL9Q5SY16 702 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 TMEM92Q6UXU6 159 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 IQCA1Q86XH1 822 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 TMEM139Q8IV31 216 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 SCYL3Q8IZE3 742 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 STK11IPQ8N1F8 1099 aa9.7□□□□□ -0.86
CTNNA1-223ENST00000520520 TC2NQ8N9U0 490 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms