RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ZNF408Q9H9D4 720 aa7□□□□□ -1.29
SKP1-207ENST00000520417 CYP26B1Q9NR63 512 aa7□□□□□ -1.29
SKP1-207ENST00000520417 ST7Q9NRC1 585 aa7□□□□□ -1.29
SKP1-207ENST00000520417 PMF1-BGLAPU3KQ54 211 aa7□□□□□ -1.29
SKP1-207ENST00000520417 SUSD5O60279 629 aa6.99□□□□□ -1.29
SKP1-207ENST00000520417 PMLP29590 882 aa6.99□□□□□ -1.29
SKP1-207ENST00000520417 SYT8Q8NBV8 401 aa6.99□□□□□ -1.29
SKP1-207ENST00000520417 NETO2Q8NC67 525 aa6.99□□□□□ -1.29
SKP1-207ENST00000520417 MICAL1Q8TDZ2 1067 aa6.99□□□□□ -1.29
SKP1-207ENST00000520417 CHAMP1Q96JM3 812 aa6.99□□□□□ -1.29
SKP1-207ENST00000520417 MRGPRX3Q96LB0 322 aa6.99□□□□□ -1.29
SKP1-207ENST00000520417 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.99□□□□□ -1.29
SKP1-207ENST00000520417 C22orf46C9J442 243 aa6.98□□□□□ -1.29
SKP1-207ENST00000520417 IGFBP6P24592 240 aaPredicted RBP6.98□□□□□ -1.29
SKP1-207ENST00000520417 INF2Q27J81 1249 aa6.98□□□□□ -1.29
SKP1-207ENST00000520417 ZNF227Q86WZ6 799 aa6.98□□□□□ -1.29
SKP1-207ENST00000520417 ADGRG2Q8IZP9 1017 aa6.98□□□□□ -1.29
SKP1-207ENST00000520417 LINC01356Q8N9X3 169 aa6.98□□□□□ -1.29
SKP1-207ENST00000520417 FRS2Q8WU20 508 aa6.98□□□□□ -1.29
SKP1-207ENST00000520417 C20orf173Q96LM9 149 aa6.98□□□□□ -1.29
SKP1-207ENST00000520417 MMP19Q99542 508 aa6.98□□□□□ -1.29
SKP1-207ENST00000520417 RNF38Q9H0F5 515 aa6.98□□□□□ -1.29
SKP1-207ENST00000520417 OTOL1A6NHN0 477 aaPredicted RBP6.97□□□□□ -1.29
SKP1-207ENST00000520417 GJB6O95452 261 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 SLC9A5Q14940 896 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 PRSS53Q2L4Q9 553 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 MCF2L2Q86YR7 1114 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 SP8Q8IXZ3 490 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 HNRNPLLQ8WVV9 542 aaKnown RBP6.97□□□□□ -1.29
SKP1-207ENST00000520417 DPF3Q92784 378 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 DIO2Q92813 273 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 RELTQ969Z4 430 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 TSPAN17Q96FV3 270 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 TINF2Q9BSI4 451 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 AP5M1Q9H0R1 490 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
SKP1-207ENST00000520417 A0A0G2JLL6 359 aaPredicted RBP6.96□□□□□ -1.3
SKP1-207ENST00000520417 A0A1B0GTL3 188 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 B8ZZF3 427 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 AGRPO00253 132 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 MEFVO15553 781 aaPredicted RBP6.96□□□□□ -1.3
SKP1-207ENST00000520417 MYO1BO43795 1136 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 ZBTB7AO95365 584 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 PLA2G1BP04054 148 aaKnown RBP6.96□□□□□ -1.3
SKP1-207ENST00000520417 FGRP09769 529 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 FBLN1P23142 703 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 FPR2P25090 351 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 HOXC12P31275 282 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 RPL11P62913 178 aaKnown RBP6.96□□□□□ -1.3
SKP1-207ENST00000520417 SF1Q15637 639 aaKnown RBP6.96□□□□□ -1.3
SKP1-207ENST00000520417 MRM1Q6IN84 353 aaKnown RBP6.96□□□□□ -1.3
SKP1-207ENST00000520417 IQCEQ6IPM2 695 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 CEP68Q76N32 757 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 EEPD1Q7L9B9 569 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 DCP2Q8IU60 420 aaKnown RBP6.96□□□□□ -1.3
SKP1-207ENST00000520417 SMARCC2Q8TAQ2 1214 aa6.96□□□□□ -1.3
SKP1-207ENST00000520417 TRMT2BQ96GJ1 504 aaKnown RBP6.96□□□□□ -1.3
SKP1-207ENST00000520417 TIMM13Q9Y5L4 95 aaPredicted RBP6.96□□□□□ -1.3
SKP1-207ENST00000520417 FFAR3O14843 346 aa6.95□□□□□ -1.3
SKP1-207ENST00000520417 KCNC1P48547 511 aa6.95□□□□□ -1.3
SKP1-207ENST00000520417 NFIXQ14938 502 aa6.95□□□□□ -1.3
SKP1-207ENST00000520417 ANKS3Q6ZW76 656 aa6.95□□□□□ -1.3
SKP1-207ENST00000520417 PPIL6Q8IXY8 311 aa6.95□□□□□ -1.3
SKP1-207ENST00000520417 NPLOC4Q8TAT6 608 aa6.95□□□□□ -1.3
SKP1-207ENST00000520417 PLEKHO2Q8TD55 490 aa6.95□□□□□ -1.3
SKP1-207ENST00000520417 FNIP1Q8TF40 1166 aa6.95□□□□□ -1.3
SKP1-207ENST00000520417 TMEFF2Q9UIK5 374 aaPredicted RBP6.95□□□□□ -1.3
SKP1-207ENST00000520417 BCL6P41182 706 aa6.94□□□□□ -1.3
SKP1-207ENST00000520417 B3GNT8Q7Z7M8 397 aa6.94□□□□□ -1.3
SKP1-207ENST00000520417 TP53I13Q8NBR0 393 aaPredicted RBP6.94□□□□□ -1.3
SKP1-207ENST00000520417 ZNF526Q8TF50 670 aaPredicted RBP6.94□□□□□ -1.3
SKP1-207ENST00000520417 DDX11Q96FC9 970 aa6.94□□□□□ -1.3
SKP1-207ENST00000520417 XYLT2Q9H1B5 865 aa6.94□□□□□ -1.3
SKP1-207ENST00000520417 PCDHA2Q9Y5H9 948 aa6.94□□□□□ -1.3
SKP1-207ENST00000520417 KRTAP9-7A8MTY7 169 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 CPP00450 1065 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 SLURP1P55000 103 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 CACNB2Q08289 660 aaPredicted RBP6.93□□□□□ -1.3
SKP1-207ENST00000520417 CYP4F3Q08477 520 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 SMAD4Q13485 552 aaKnown RBP6.93□□□□□ -1.3
SKP1-207ENST00000520417 E4F1Q66K89 784 aaPredicted RBP6.93□□□□□ -1.3
SKP1-207ENST00000520417 MILR1Q7Z6M3 343 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 CCDC103Q8IW40 242 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 ZBTB8AQ96BR9 441 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 TMEM169Q96HH4 297 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 SPATA25Q9BR10 227 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 YIPF4Q9BSR8 244 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 ADAM7Q9H2U9 754 aa6.93□□□□□ -1.3
SKP1-207ENST00000520417 PPP1R1BQ9UD71 204 aaPredicted RBP6.93□□□□□ -1.3
SKP1-207ENST00000520417 COA3Q9Y2R0 106 aaPredicted RBP6.93□□□□□ -1.3
SKP1-207ENST00000520417 PRRG2O14669 202 aa6.92□□□□□ -1.3
SKP1-207ENST00000520417 FOXD2O60548 495 aaPredicted RBP6.92□□□□□ -1.3
SKP1-207ENST00000520417 RBM10P98175 930 aaKnown RBP6.92□□□□□ -1.3
SKP1-207ENST00000520417 KCNAB2Q13303 367 aa6.92□□□□□ -1.3
SKP1-207ENST00000520417 CD300LDQ6UXZ3 194 aa6.92□□□□□ -1.3
SKP1-207ENST00000520417 CELF2-AS1Q8N7Q2 184 aa6.92□□□□□ -1.3
SKP1-207ENST00000520417 TMEM145Q8NBT3 493 aa6.92□□□□□ -1.3
SKP1-207ENST00000520417 CCDC140Q96MF4 163 aa6.92□□□□□ -1.3
SKP1-207ENST00000520417 NOX5Q96PH1 765 aa6.92□□□□□ -1.3
SKP1-207ENST00000520417 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms