RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 ZBTB47Q9UFB7 747 aaPredicted RBP18.47■□□□□ 0.55
CSGALNACT1-208ENST00000520003 MTMR7Q9Y216 660 aa18.47■□□□□ 0.55
CSGALNACT1-208ENST00000520003 SCN5AQ14524 2016 aa18.47■□□□□ 0.55
CSGALNACT1-208ENST00000520003 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 GTPBP6O43824 516 aaPredicted RBP18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 TOP1P11387 765 aaKnown RBP18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 RPS6P62753 249 aaKnown RBP18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 NMIQ13287 307 aaPredicted RBP18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 PPP2R5BQ15173 497 aa18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 HERC6Q8IVU3 1022 aa18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 DNERQ8NFT8 737 aa18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 SCFD2Q8WU76 684 aa18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 C1QTNF1Q9BXJ1 281 aa18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 GPHNQ9NQX3 736 aaPredicted RBP18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 WDR19Q8NEZ3 1342 aa18.46■□□□□ 0.55
CSGALNACT1-208ENST00000520003 TANC1Q9C0D5 1861 aa18.46■□□□□ 0.54
CSGALNACT1-208ENST00000520003 PDHBP11177 359 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 CALML3P27482 149 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 BRDTQ58F21 947 aaPredicted RBP18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 FAM47CQ5HY64 1035 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 KRT40Q6A162 431 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 RNF207Q6ZRF8 634 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 PPP1R13LQ8WUF5 828 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 CTAGE1Q96RT6 745 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 CERS4Q9HA82 394 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 PNMA2Q9UL42 364 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 COG5Q9UP83 839 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 FRMPD2Q68DX3 1309 aaPredicted RBP18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 RAD50Q92878 1312 aa18.45■□□□□ 0.54
CSGALNACT1-208ENST00000520003 TCF20Q9UGU0 1960 aaKnown RBP18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 TLL1O43897 1013 aa18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 BAIAP3O94812 1187 aa18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 SNHG28P0DPA3 235 aa18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 PDE4DQ08499 809 aa18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 SKIV2LQ15477 1246 aaKnown RBP18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 RRP12Q5JTH9 1297 aaKnown RBP18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 COPS5Q92905 334 aa18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 GPCPD1Q9NPB8 672 aa18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 TOMM22Q9NS69 142 aa18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 CCDC171Q6TFL3 1326 aa18.44■□□□□ 0.54
CSGALNACT1-208ENST00000520003 LPXNO60711 386 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 ARIH2O95376 493 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 HAND2P61296 217 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 ZNF543Q08ER8 600 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 BFSP2Q13515 415 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 GPNMBQ14956 572 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 CCDC62Q6P9F0 684 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 SPRED2Q7Z698 418 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 SMC5Q8IY18 1101 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 RETREG2Q8NC44 543 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 RGS22Q8NE09 1264 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 LNPKQ9C0E8 428 aa18.43■□□□□ 0.54
CSGALNACT1-208ENST00000520003 TXNP10599 105 aaKnown RBP18.42■□□□□ 0.54
CSGALNACT1-208ENST00000520003 GRB10Q13322 594 aa18.42■□□□□ 0.54
CSGALNACT1-208ENST00000520003 SESTD1Q86VW0 696 aa18.42■□□□□ 0.54
CSGALNACT1-208ENST00000520003 TBC1D10CQ8IV04 446 aa18.42■□□□□ 0.54
CSGALNACT1-208ENST00000520003 TET1Q8NFU7 2136 aa18.42■□□□□ 0.54
CSGALNACT1-208ENST00000520003 ARNTL2Q8WYA1 636 aa18.42■□□□□ 0.54
CSGALNACT1-208ENST00000520003 MPHOSPH6Q99547 160 aaKnown RBP18.42■□□□□ 0.54
CSGALNACT1-208ENST00000520003 KIF28PB7ZC32 967 aa18.41■□□□□ 0.54
CSGALNACT1-208ENST00000520003 RBL2Q08999 1139 aa18.41■□□□□ 0.54
CSGALNACT1-208ENST00000520003 CAGE1Q8TC20 777 aa18.41■□□□□ 0.54
CSGALNACT1-208ENST00000520003 AFAP1L1Q8TED9 768 aa18.41■□□□□ 0.54
CSGALNACT1-208ENST00000520003 FAM122AQ96E09 287 aa18.41■□□□□ 0.54
CSGALNACT1-208ENST00000520003 TTC14Q96N46 770 aa18.41■□□□□ 0.54
CSGALNACT1-208ENST00000520003 FTOQ9C0B1 505 aaKnown RBP eCLIP18.41■□□□□ 0.54
CSGALNACT1-208ENST00000520003 MAF1Q9H063 256 aa18.41■□□□□ 0.54
CSGALNACT1-208ENST00000520003 ARIH1Q9Y4X5 557 aaPredicted RBP18.41■□□□□ 0.54
CSGALNACT1-208ENST00000520003 TRIM6-TRIM34B2RNG4 842 aa18.4■□□□□ 0.54
CSGALNACT1-208ENST00000520003 PCP11498 1178 aaKnown RBP18.4■□□□□ 0.54
CSGALNACT1-208ENST00000520003 WDR5P61964 334 aaKnown RBP18.4■□□□□ 0.54
CSGALNACT1-208ENST00000520003 PTGISQ16647 500 aa18.4■□□□□ 0.54
CSGALNACT1-208ENST00000520003 DHX38Q92620 1227 aaKnown RBP18.4■□□□□ 0.54
CSGALNACT1-208ENST00000520003 KAT2BQ92831 832 aa18.4■□□□□ 0.54
CSGALNACT1-208ENST00000520003 HLA-CQ95604 372 aa18.4■□□□□ 0.54
CSGALNACT1-208ENST00000520003 EPHX3Q9H6B9 360 aa18.4■□□□□ 0.54
CSGALNACT1-208ENST00000520003 NEDD4P46934 1319 aa18.4■□□□□ 0.54
CSGALNACT1-208ENST00000520003 PTPRSQ13332 1948 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 LCHNA4D1U4 455 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 CXCL10P02778 98 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 SDSP20132 328 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 ARHGAP1Q07960 439 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 AAMPQ13685 434 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 GDF6Q6KF10 455 aaPredicted RBP18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 MFSD6Q6ZSS7 791 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 AFG1LQ8WV93 481 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 RILPL2Q969X0 211 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 LRFN3Q9BTN0 628 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 OSBPL3Q9H4L5 887 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 LMCD1Q9NZU5 365 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 NOD1Q9Y239 953 aa18.39■□□□□ 0.53
CSGALNACT1-208ENST00000520003 B4DLN1 442 aa18.38■□□□□ 0.53
CSGALNACT1-208ENST00000520003 MMP3P08254 477 aa18.38■□□□□ 0.53
CSGALNACT1-208ENST00000520003 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
CSGALNACT1-208ENST00000520003 MRPL12P52815 198 aaKnown RBP18.38■□□□□ 0.53
CSGALNACT1-208ENST00000520003 GPATCH4Q5T3I0 446 aaKnown RBP18.38■□□□□ 0.53
CSGALNACT1-208ENST00000520003 PLEKHM2Q8IWE5 1019 aa18.38■□□□□ 0.53
CSGALNACT1-208ENST00000520003 CCDC155Q8N6L0 562 aa18.38■□□□□ 0.53
CSGALNACT1-208ENST00000520003 PARNO95453 639 aaKnown RBP18.37■□□□□ 0.53
CSGALNACT1-208ENST00000520003 SELPP16109 830 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms