RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 OVOL3O00110 214 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 ZNF16P17020 682 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-209ENST00000519485 HMGA2P52926 109 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 SURF1Q15526 300 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 PRR31Q5SQ13 230 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 UNC5AQ6ZN44 842 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 MIB1Q86YT6 1006 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 Q8N1X5 172 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 TTLL6Q8N841 843 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 TMEM87AQ8NBN3 555 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 CHST13Q8NET6 341 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 RNF34Q969K3 372 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 DDX11Q96FC9 970 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 ZDHHC15Q96MV8 337 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 MCMBPQ9BTE3 642 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 SCAND2PQ9GZW5 306 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-209ENST00000519485 RXFP1Q9HBX9 757 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 RWDD3Q9Y3V2 267 aa5.17□□□□□ -1.58
CSMD3-209ENST00000519485 FAM86C2PA6NEL3 165 aa5.16□□□□□ -1.58
CSMD3-209ENST00000519485 C9orf118A6NHY6 69 aa5.16□□□□□ -1.58
CSMD3-209ENST00000519485 SLPIP03973 132 aa5.16□□□□□ -1.58
CSMD3-209ENST00000519485 TP53P04637 393 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-209ENST00000519485 KRTAP1-1Q07627 177 aa5.16□□□□□ -1.58
CSMD3-209ENST00000519485 SMAD4Q13485 552 aaKnown RBP5.16□□□□□ -1.58
CSMD3-209ENST00000519485 CDSNQ15517 529 aa5.16□□□□□ -1.58
CSMD3-209ENST00000519485 ZYXQ15942 572 aaKnown RBP5.16□□□□□ -1.58
CSMD3-209ENST00000519485 GLB1LQ6UWU2 654 aa5.16□□□□□ -1.58
CSMD3-209ENST00000519485 CDK5RAP1Q96SZ6 601 aaKnown RBP5.16□□□□□ -1.58
CSMD3-209ENST00000519485 SPON2Q9BUD6 331 aa5.16□□□□□ -1.58
CSMD3-209ENST00000519485 GRB10Q13322 594 aa5.15□□□□□ -1.59
CSMD3-209ENST00000519485 ETV3LQ6ZN32 361 aa5.15□□□□□ -1.59
CSMD3-209ENST00000519485 DCP2Q8IU60 420 aaKnown RBP5.15□□□□□ -1.59
CSMD3-209ENST00000519485 HAUS7Q99871 368 aa5.15□□□□□ -1.59
CSMD3-209ENST00000519485 KLHL25Q9H0H3 589 aa5.15□□□□□ -1.59
CSMD3-209ENST00000519485 BACE2Q9Y5Z0 518 aa5.15□□□□□ -1.59
CSMD3-209ENST00000519485 SHROOM4Q9ULL8 1493 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 C2orf71A6NGG8 1288 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 PAMP19021 973 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 SEPHS1P49903 392 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 C9orf131Q5VYM1 1079 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 SPRED1Q7Z699 444 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 PLEKHH3Q7Z736 793 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 TXNDC5Q8NBS9 432 aaKnown RBP5.14□□□□□ -1.59
CSMD3-209ENST00000519485 DNERQ8NFT8 737 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 KISS1RQ969F8 398 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-209ENST00000519485 RCC1LQ96I51 464 aaKnown RBP5.14□□□□□ -1.59
CSMD3-209ENST00000519485 FERD3LQ96RJ6 166 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 MENTQ9BUN1 341 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 MRIQ9BWK5 157 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 SLITRK6Q9H5Y7 841 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 CD248Q9HCU0 757 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 GULP1Q9UBP9 304 aa5.14□□□□□ -1.59
CSMD3-209ENST00000519485 ZCCHC6Q5VYS8 1495 aaKnown RBP5.13□□□□□ -1.59
CSMD3-209ENST00000519485 NPHP3-ACAD11A0A0J9YXS1 232 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 C7orf72A4D263 438 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 STXBP3O00186 592 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 LAMTOR5O43504 91 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 FZD7O75084 574 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 ARHGEF39Q8N4T4 335 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 PLEKHO2Q8TD55 490 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 SH3RF3Q8TEJ3 882 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-209ENST00000519485 LCORQ96JN0 433 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-209ENST00000519485 GBP3Q9H0R5 595 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 NGRNQ9NPE2 291 aaKnown RBP5.13□□□□□ -1.59
CSMD3-209ENST00000519485 ST6GALNAC2Q9UJ37 374 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 SLC12A7Q9Y666 1083 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 CLSPNQ9HAW4 1339 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 LTBP3Q9NS15 1303 aa5.13□□□□□ -1.59
CSMD3-209ENST00000519485 NPHS1O60500 1241 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 NTRK1P04629 796 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 SLC6A11P48066 632 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 ITGA1P56199 1179 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 PPP2R5DQ14738 602 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 PKN3Q6P5Z2 889 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 USP51Q70EK9 711 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 LIMS2Q7Z4I7 341 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 ZC3H18Q86VM9 953 aaKnown RBP5.12□□□□□ -1.59
CSMD3-209ENST00000519485 MMP19Q99542 508 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 ZNF747Q9BV97 191 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 BACH2Q9BYV9 841 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 KLC2Q9H0B6 622 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 PHAXQ9H814 394 aaKnown RBP5.12□□□□□ -1.59
CSMD3-209ENST00000519485 PPP4R1LQ9P1A2 415 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 CGGBP1Q9UFW8 167 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-209ENST00000519485 ZNF536O15090 1300 aa5.12□□□□□ -1.59
CSMD3-209ENST00000519485 B4GALT3O60512 393 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 PPM1BO75688 479 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 ZNF28P17035 718 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 ZNF76P36508 570 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 AMPD2Q01433 879 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 MCTP2Q6DN12 878 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 CPNE8Q86YQ8 564 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 C19orf47Q8N9M1 422 aaKnown RBP5.11□□□□□ -1.59
CSMD3-209ENST00000519485 USP33Q8TEY7 942 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 SEC14L1Q92503 715 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 MBD6Q96DN6 1003 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 AP5M1Q9H0R1 490 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 FAM86C1Q9NVL1 165 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 MYO15BQ96JP2 1530 aa5.11□□□□□ -1.59
CSMD3-209ENST00000519485 VAMP4O75379 141 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms