RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 PDE4DQ08499 809 aa16.06■□□□□ 0.16
VDAC3-204ENST00000519072 NMIQ13287 307 aaPredicted RBP16.06■□□□□ 0.16
VDAC3-204ENST00000519072 HDAC1Q13547 482 aaPredicted RBP16.06■□□□□ 0.16
VDAC3-204ENST00000519072 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
VDAC3-204ENST00000519072 BRDTQ58F21 947 aaPredicted RBP16.06■□□□□ 0.16
VDAC3-204ENST00000519072 MFSD6Q6ZSS7 791 aa16.06■□□□□ 0.16
VDAC3-204ENST00000519072 SCFD2Q8WU76 684 aa16.06■□□□□ 0.16
VDAC3-204ENST00000519072 GPHNQ9NQX3 736 aaPredicted RBP16.06■□□□□ 0.16
VDAC3-204ENST00000519072 TET1Q8NFU7 2136 aa16.06■□□□□ 0.16
VDAC3-204ENST00000519072 KIAA1217Q5T5P2 1943 aa16.06■□□□□ 0.16
VDAC3-204ENST00000519072 RAD50Q92878 1312 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 A6NJR5 290 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 ZBBXA8MT70 800 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 TNFRSF10AO00220 468 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 KPNA6O60684 536 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 IGFBP4P22692 258 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 RABGGTBP53611 331 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 NBPF20Q3BBV1 942 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 NFRKBQ6P4R8 1299 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 TBC1D10CQ8IV04 446 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 CRBNQ96SW2 442 aa16.05■□□□□ 0.16
VDAC3-204ENST00000519072 RNF41Q9H4P4 317 aaPredicted RBP16.05■□□□□ 0.16
VDAC3-204ENST00000519072 XIRP2A4UGR9 3374 aa16.04■□□□□ 0.16
VDAC3-204ENST00000519072 B4DLN1 442 aa16.04■□□□□ 0.16
VDAC3-204ENST00000519072 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
VDAC3-204ENST00000519072 RFC2P35250 354 aa16.04■□□□□ 0.16
VDAC3-204ENST00000519072 MRPL12P52815 198 aaKnown RBP16.04■□□□□ 0.16
VDAC3-204ENST00000519072 PTPN11Q06124 597 aaPredicted RBP16.04■□□□□ 0.16
VDAC3-204ENST00000519072 TTLL4Q14679 1199 aa16.04■□□□□ 0.16
VDAC3-204ENST00000519072 CCDC85BQ15834 202 aaPredicted RBP16.04■□□□□ 0.16
VDAC3-204ENST00000519072 FAM47CQ5HY64 1035 aa16.04■□□□□ 0.16
VDAC3-204ENST00000519072 GPATCH4Q5T3I0 446 aaKnown RBP16.04■□□□□ 0.16
VDAC3-204ENST00000519072 PPP2R2DQ66LE6 453 aa16.04■□□□□ 0.16
VDAC3-204ENST00000519072 RGS22Q8NE09 1264 aa16.04■□□□□ 0.16
VDAC3-204ENST00000519072 ASB2Q96Q27 587 aa16.04■□□□□ 0.16
VDAC3-204ENST00000519072 MAF1Q9H063 256 aa16.04■□□□□ 0.16
VDAC3-204ENST00000519072 PRRC2BQ5JSZ5 2229 aaKnown RBP16.04■□□□□ 0.16
VDAC3-204ENST00000519072 TRIM6-TRIM34B2RNG4 842 aa16.03■□□□□ 0.16
VDAC3-204ENST00000519072 MYOGP15173 224 aa16.03■□□□□ 0.16
VDAC3-204ENST00000519072 NT5C2P49902 561 aa16.03■□□□□ 0.16
VDAC3-204ENST00000519072 MFAP1P55081 439 aaKnown RBP16.03■□□□□ 0.16
VDAC3-204ENST00000519072 MRPS5P82675 430 aaKnown RBP16.03■□□□□ 0.16
VDAC3-204ENST00000519072 DEFB128Q7Z7B8 93 aa16.03■□□□□ 0.16
VDAC3-204ENST00000519072 DGKHQ86XP1 1220 aa16.03■□□□□ 0.16
VDAC3-204ENST00000519072 ESR2Q92731 530 aa16.03■□□□□ 0.16
VDAC3-204ENST00000519072 COPS5Q92905 334 aa16.03■□□□□ 0.16
VDAC3-204ENST00000519072 NEDD4P46934 1319 aa16.02■□□□□ 0.16
VDAC3-204ENST00000519072 ARIH2O95376 493 aa16.02■□□□□ 0.16
VDAC3-204ENST00000519072 TXNP10599 105 aaKnown RBP16.02■□□□□ 0.16
VDAC3-204ENST00000519072 ACTN1P12814 892 aa16.02■□□□□ 0.16
VDAC3-204ENST00000519072 USH1GQ495M9 461 aa16.02■□□□□ 0.16
VDAC3-204ENST00000519072 IQCF3P0C7M6 154 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 PRR29P0C7W0 189 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 GOLGA8HP0CJ92 632 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 CCDC178Q5BJE1 867 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 RETREG2Q8NC44 543 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
VDAC3-204ENST00000519072 RILPL2Q969X0 211 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 SLC9A7Q96T83 725 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 ZKSCAN3Q9BRR0 538 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 LNPKQ9C0E8 428 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 CPVLQ9H3G5 476 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 PTPRSQ13332 1948 aa16.01■□□□□ 0.15
VDAC3-204ENST00000519072 TCF20Q9UGU0 1960 aaKnown RBP16■□□□□ 0.15
VDAC3-204ENST00000519072 ABCB11O95342 1321 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 MYH7BA7E2Y1 1941 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 ZNF213O14771 459 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 SDSP20132 328 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 BFSP2Q13515 415 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 CDC37Q16543 378 aaPredicted RBP16■□□□□ 0.15
VDAC3-204ENST00000519072 CCDC62Q6P9F0 684 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 PNMA1Q8ND90 353 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 PHOSPHO2Q8TCD6 241 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 ADAMTS19Q8TE59 1207 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 PPP1R13LQ8WUF5 828 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 ANKS1AQ92625 1134 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 UBA5Q9GZZ9 404 aa16■□□□□ 0.15
VDAC3-204ENST00000519072 TSPYL2Q9H2G4 693 aaPredicted RBP16■□□□□ 0.15
VDAC3-204ENST00000519072 CA3P07451 260 aa15.99■□□□□ 0.15
VDAC3-204ENST00000519072 POU3F3P20264 500 aaPredicted RBP15.99■□□□□ 0.15
VDAC3-204ENST00000519072 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
VDAC3-204ENST00000519072 SMC5Q8IY18 1101 aa15.99■□□□□ 0.15
VDAC3-204ENST00000519072 SYTL5Q8TDW5 730 aaPredicted RBP15.99■□□□□ 0.15
VDAC3-204ENST00000519072 NSUN6Q8TEA1 469 aaKnown RBP15.99■□□□□ 0.15
VDAC3-204ENST00000519072 TBC1D5Q92609 795 aa15.99■□□□□ 0.15
VDAC3-204ENST00000519072 TAAR1Q96RJ0 339 aa15.99■□□□□ 0.15
VDAC3-204ENST00000519072 NOD1Q9Y239 953 aa15.99■□□□□ 0.15
VDAC3-204ENST00000519072 KDM4AO75164 1064 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 GH1P01241 217 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 MMP3P08254 477 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 ARHGAP1Q07960 439 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 AAMPQ13685 434 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 ASPRV1Q53RT3 343 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 SESTD1Q86VW0 696 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 MCF2L2Q86YR7 1114 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 ADGRF4Q8IZF3 695 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 MICALL1Q8N3F8 863 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 CCDC155Q8N6L0 562 aa15.98■□□□□ 0.15
VDAC3-204ENST00000519072 IL27Q8NEV9 243 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms