RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ZNF232Q9UNY5 417 aa14.94□□□□□ -0.02
PABPC1-208ENST00000519004 PTPRUQ92729 1446 aa14.94□□□□□ -0.02
PABPC1-208ENST00000519004 PDS5AQ29RF7 1337 aaKnown RBP14.94□□□□□ -0.02
PABPC1-208ENST00000519004 ABCC12Q96J65 1359 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 PDLIM1O00151 329 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 TULP1O00294 542 aaPredicted RBP14.93□□□□□ -0.02
PABPC1-208ENST00000519004 IGF2BP3O00425 579 aaKnown RBP eCLIP14.93□□□□□ -0.023e-9■■■■■ 37.6
PABPC1-208ENST00000519004 RNF113AO15541 343 aaKnown RBP14.93□□□□□ -0.02
PABPC1-208ENST00000519004 MRPS35P82673 323 aaKnown RBP14.93□□□□□ -0.02
PABPC1-208ENST00000519004 PTPN12Q05209 780 aaKnown RBP14.93□□□□□ -0.02
PABPC1-208ENST00000519004 CTDSPL2Q05D32 466 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 RILPL1Q5EBL4 403 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 MDM1Q8TC05 714 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 CENPTQ96BT3 561 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 BICD1Q96G01 975 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 KRT12Q99456 494 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 ABCF3Q9NUQ8 709 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 NWD1Q149M9 1564 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 KRT16P08779 473 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 MYBP10242 640 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 CTNNA1P35221 906 aaKnown RBP14.93□□□□□ -0.02
PABPC1-208ENST00000519004 IARSP41252 1262 aaKnown RBP14.93□□□□□ -0.02
PABPC1-208ENST00000519004 SF3A3Q12874 501 aaKnown RBP eCLIP14.93□□□□□ -0.024e-9■■■■■ 29.3
PABPC1-208ENST00000519004 TRIM68Q6AZZ1 485 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 DIS3L2Q8IYB7 885 aaKnown RBP14.93□□□□□ -0.02
PABPC1-208ENST00000519004 CCDC155Q8N6L0 562 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 NKX2-3Q8TAU0 364 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 OSBP2Q969R2 916 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 SUDS3Q9H7L9 328 aaPredicted RBP14.93□□□□□ -0.02
PABPC1-208ENST00000519004 PCDHA13Q9Y5I0 950 aa14.93□□□□□ -0.02
PABPC1-208ENST00000519004 MYH10P35580 1976 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 UBOX5O94941 541 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 MMP1P03956 469 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 GNAQP50148 359 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 CDK17Q00537 523 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 SAFBQ15424 915 aaKnown RBP eCLIP14.92□□□□□ -0.02
PABPC1-208ENST00000519004 SPA17Q15506 151 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 RALYLQ86SE5 291 aaKnown RBP14.92□□□□□ -0.02
PABPC1-208ENST00000519004 STAMQ92783 540 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 IFIH1Q9BYX4 1025 aaKnown RBP14.92□□□□□ -0.02
PABPC1-208ENST00000519004 SALL4Q9UJQ4 1053 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 IQSEC3Q9UPP2 1182 aaPredicted RBP14.92□□□□□ -0.02
PABPC1-208ENST00000519004 LRRC42Q9Y546 428 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 STK36Q9NRP7 1315 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 RAD51CO43502 376 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 CTNND1O60716 968 aaKnown RBP14.92□□□□□ -0.02
PABPC1-208ENST00000519004 IGKV5-2P06315 115 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 PLEKP08567 350 aaPredicted RBP14.92□□□□□ -0.02
PABPC1-208ENST00000519004 KLK7P49862 253 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 ZBED6P86452 979 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 KLHDC7AQ5VTJ3 777 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 CACNA2D4Q7Z3S7 1137 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 UBE2OQ9C0C9 1292 aaKnown RBP14.92□□□□□ -0.02
PABPC1-208ENST00000519004 ECT2Q9H8V3 914 aa14.92□□□□□ -0.02
PABPC1-208ENST00000519004 FAM217BQ9NTX9 383 aaPredicted RBP14.92□□□□□ -0.02
PABPC1-208ENST00000519004 ANGEL1Q9UNK9 670 aaKnown RBP14.92□□□□□ -0.02
PABPC1-208ENST00000519004 XDHP47989 1333 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 FGAP02671 866 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 APOA5Q6Q788 366 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.91□□□□□ -0.022e-6■■■■■ 54.4
PABPC1-208ENST00000519004 SYMPKQ92797 1274 aaKnown RBP14.91□□□□□ -0.02
PABPC1-208ENST00000519004 ISCUQ9H1K1 167 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 BLZF1Q9H2G9 400 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 CNOT10Q9H9A5 744 aaKnown RBP14.91□□□□□ -0.02
PABPC1-208ENST00000519004 LRRC4CQ9HCJ2 640 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 RNF14Q9UBS8 474 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 DENND2AQ9ULE3 1009 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 KCNJ14Q9UNX9 436 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 PARP4Q9UKK3 1724 aaKnown RBP14.91□□□□□ -0.02
PABPC1-208ENST00000519004 SRGNP10124 158 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 ABCD1P33897 745 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 ERVK-9P63128 1117 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 KIAA0753Q2KHM9 967 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 RRP12Q5JTH9 1297 aaKnown RBP14.91□□□□□ -0.02
PABPC1-208ENST00000519004 MICU3Q86XE3 530 aa14.91□□□□□ -0.02
PABPC1-208ENST00000519004 H7C1D1 291 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 MYL1P05976 194 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 GNAZP19086 355 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 TPP2P29144 1249 aaPredicted RBP14.9□□□□□ -0.02
PABPC1-208ENST00000519004 MSH2P43246 934 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 SCNN1BP51168 640 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 GALNTL6Q49A17 601 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 CMPK2Q5EBM0 449 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 LRRC34Q8IZ02 419 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 KIF2BQ8N4N8 673 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 EIF1ADQ8N9N8 165 aaKnown RBP14.9□□□□□ -0.02
PABPC1-208ENST00000519004 LRRC45Q96CN5 670 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 TLCD1Q96CP7 247 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 DTNBP1Q96EV8 351 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 CCDC42Q96M95 316 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 THRAP3Q9Y2W1 955 aaKnown RBP14.9□□□□□ -0.02
PABPC1-208ENST00000519004 ACEP12821 1306 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 CHD1O14646 1710 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 USP6P35125 1406 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 TRIM49BA6NDI0 452 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 CYP27B1O15528 508 aa14.9□□□□□ -0.02
PABPC1-208ENST00000519004 FMNL1O95466 1100 aaPredicted RBP14.9□□□□□ -0.02
PABPC1-208ENST00000519004 TRIM21P19474 475 aaKnown RBP14.9□□□□□ -0.02
PABPC1-208ENST00000519004 SP100P23497 879 aaPredicted RBP14.9□□□□□ -0.02
PABPC1-208ENST00000519004 GUCY1A2P33402 732 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms