RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 H3BQ06 376 aaPredicted RBP10.55□□□□□ -0.72
PVT1-207ENST00000518528 PRDM1O75626 825 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 ICAM1P05362 532 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 ALDH5A1P51649 535 aaPredicted RBP10.55□□□□□ -0.72
PVT1-207ENST00000518528 PTPN5P54829 565 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 DEFB103AP81534 67 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 FOXK2Q01167 660 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 BAATQ14032 418 aaPredicted RBP10.55□□□□□ -0.72
PVT1-207ENST00000518528 MUM1L1Q5H9M0 696 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 TMEM63BQ5T3F8 832 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 RCSD1Q6JBY9 416 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 SPRED2Q7Z698 418 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 ADHFE1Q8IWW8 467 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 NEK9Q8TD19 979 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
PVT1-207ENST00000518528 TRANK1O15050 2925 aa10.55□□□□□ -0.72
PVT1-207ENST00000518528 XIRP2A4UGR9 3374 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 COL11A1P12107 1806 aaPredicted RBP10.54□□□□□ -0.72
PVT1-207ENST00000518528 CXCL10P02778 98 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 AMHP03971 560 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 TFAP4Q01664 338 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 ZP2Q05996 745 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 FAM117BQ6P1L5 589 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 HFE2Q6ZVN8 426 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 KCTD1Q719H9 257 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 SESTD1Q86VW0 696 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 BANK1Q8NDB2 785 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 PABPC5Q96DU9 382 aaKnown RBP10.54□□□□□ -0.72
PVT1-207ENST00000518528 PRR12Q9ULL5 1215 aa10.54□□□□□ -0.72
PVT1-207ENST00000518528 ZFYP08048 801 aaPredicted RBP10.53□□□□□ -0.72
PVT1-207ENST00000518528 TXNP10599 105 aaKnown RBP10.53□□□□□ -0.72
PVT1-207ENST00000518528 CASTP20810 708 aaKnown RBP10.53□□□□□ -0.72
PVT1-207ENST00000518528 CALML3P27482 149 aa10.53□□□□□ -0.72
PVT1-207ENST00000518528 SNAP25P60880 206 aa10.53□□□□□ -0.72
PVT1-207ENST00000518528 RBL2Q08999 1139 aa10.53□□□□□ -0.72
PVT1-207ENST00000518528 CCDC96Q2M329 555 aa10.53□□□□□ -0.72
PVT1-207ENST00000518528 TMCO2Q7Z6W1 182 aaPredicted RBP10.53□□□□□ -0.72
PVT1-207ENST00000518528 C7orf31Q8N865 590 aa10.53□□□□□ -0.72
PVT1-207ENST00000518528 DNERQ8NFT8 737 aa10.53□□□□□ -0.72
PVT1-207ENST00000518528 APPBP2Q92624 585 aa10.53□□□□□ -0.72
PVT1-207ENST00000518528 STX8Q9UNK0 236 aa10.53□□□□□ -0.72
PVT1-207ENST00000518528 EMSYQ7Z589 1322 aa10.53□□□□□ -0.72
PVT1-207ENST00000518528 PLIN4Q96Q06 1357 aa10.52□□□□□ -0.72
PVT1-207ENST00000518528 PARP14Q460N5 1801 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 C19orf67A6NJJ6 358 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 MS4A1P11836 297 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 RLBP1P12271 317 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 CKBP12277 381 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 RNF207Q6ZRF8 634 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 SUGP1Q8IWZ8 645 aaKnown RBP10.52□□□□□ -0.73
PVT1-207ENST00000518528 PPP1R13LQ8WUF5 828 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 DCAF4Q8WV16 495 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 CHMP4CQ96CF2 233 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 PURBQ96QR8 312 aaKnown RBP10.52□□□□□ -0.73
PVT1-207ENST00000518528 YME1L1Q96TA2 773 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 C17orf80Q9BSJ5 609 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 KATNAL1Q9BW62 490 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 IRF2BPLQ9H1B7 796 aa10.52□□□□□ -0.73
PVT1-207ENST00000518528 NSUN3Q9H649 340 aaKnown RBP10.52□□□□□ -0.73
PVT1-207ENST00000518528 TSPY2A6NKD2 308 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 PATL2C9JE40 543 aaKnown RBP10.51□□□□□ -0.73
PVT1-207ENST00000518528 RNF113AO15541 343 aaKnown RBP10.51□□□□□ -0.73
PVT1-207ENST00000518528 GPAA1O43292 621 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 NBNO60934 754 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 LGR5O75473 907 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 GH1P01241 217 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 CHGBP05060 677 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 PTK7Q13308 1070 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 GPM6BQ13491 265 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 DGKDQ16760 1214 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 EPC2Q52LR7 807 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 HERC4Q5GLZ8 1057 aaPredicted RBP10.51□□□□□ -0.73
PVT1-207ENST00000518528 TCEAL5Q5H9L2 206 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 SYDE2Q5VT97 1194 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 GDF6Q6KF10 455 aaPredicted RBP10.51□□□□□ -0.73
PVT1-207ENST00000518528 MYOCDQ8IZQ8 938 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 KBTBD3Q8NAB2 608 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 AFG1LQ8WV93 481 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 GPATCH3Q96I76 525 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 NAPBQ9H115 298 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 RANBP17Q9H2T7 1088 aaKnown RBP10.51□□□□□ -0.73
PVT1-207ENST00000518528 CHMP4BQ9H444 224 aaKnown RBP10.51□□□□□ -0.73
PVT1-207ENST00000518528 CLDND1Q9NY35 253 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 MTMR7Q9Y216 660 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 GBF1Q92538 1859 aa10.51□□□□□ -0.73
PVT1-207ENST00000518528 ZDBF2Q9HCK1 2354 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 H3BNC9 293 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 NFIBO00712 420 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 EDNRBP24530 442 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 IRS1P35568 1242 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 BMP8AQ7Z5Y6 402 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 IFNL3Q8IZI9 196 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 COPS5Q92905 334 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 OSBP2Q969R2 916 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 EPB41L4AQ9HCS5 686 aaPredicted RBP10.5□□□□□ -0.73
PVT1-207ENST00000518528 GTF2IRD1Q9UHL9 959 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 MCM3APO60318 1980 aa10.5□□□□□ -0.73
PVT1-207ENST00000518528 PTPRZ1P23471 2315 aaPredicted RBP10.49□□□□□ -0.73
PVT1-207ENST00000518528 MMP3P08254 477 aa10.49□□□□□ -0.73
PVT1-207ENST00000518528 RPS6P62753 249 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms