RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 P2RX7Q99572 595 aaKnown RBP12.42□□□□□ -0.42
SPIDR-206ENST00000518074 SH2D4AQ9H788 454 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 PCDHA5Q9Y5H7 936 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 ROBO3Q96MS0 1386 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 HERVK_113P62684 666 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 ZNF174Q15697 407 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 RESP18Q5W5W9 173 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 CATSPERGQ6ZRH7 1159 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 LRRC8AQ8IWT6 810 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 GPRC5AQ8NFJ5 357 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 SHISA4Q96DD7 197 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 CUTAO60888 179 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 PRKCZQ05513 592 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 SHROOM1Q2M3G4 852 aaPredicted RBP12.41□□□□□ -0.42
SPIDR-206ENST00000518074 TRMT44Q8IYL2 757 aaKnown RBP12.41□□□□□ -0.42
SPIDR-206ENST00000518074 SERTAD1Q9UHV2 236 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 RABGAP1Q9Y3P9 1069 aa12.41□□□□□ -0.42
SPIDR-206ENST00000518074 STK36Q9NRP7 1315 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 BAZ2AQ9UIF9 1905 aaKnown RBP12.4□□□□□ -0.42
SPIDR-206ENST00000518074 USP27XA6NNY8 438 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 SERPINC1P01008 464 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 MAPK4P31152 587 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 TPM4P67936 248 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 KRBA2Q6ZNG9 492 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 LPAR1Q92633 364 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 MRFAP1L1Q96HT8 127 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 FEZ1Q99689 392 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 POTEFA5A3E0 1075 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 XBP1P17861 261 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 CASP1P29466 404 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 AFMP43652 599 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 CDK8P49336 464 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 CCDC96Q2M329 555 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 SARM1Q6SZW1 724 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 RINLQ6ZS11 566 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 SLC44A5Q8NCS7 719 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 CTCFLQ8NI51 663 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-206ENST00000518074 STAMQ92783 540 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 HPSEQ9Y251 543 aa12.4□□□□□ -0.42
SPIDR-206ENST00000518074 GREB1LQ9C091 1923 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-206ENST00000518074 WNT7AO00755 349 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
SPIDR-206ENST00000518074 TNNT1P13805 278 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 FLT3LGP49771 235 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 TFAP4Q01664 338 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 GOLGA8FQ08AF8 430 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 GOLGA8DPQ0D2H9 430 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 SEPT2Q15019 361 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 PKN1Q16512 942 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 RILPL1Q5EBL4 403 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 DHX58Q96C10 678 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 FOXP1Q9H334 677 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-206ENST00000518074 MKNK2Q9HBH9 465 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 ANAPC4Q9UJX5 808 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 GJD2Q9UKL4 321 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 ADCY3O60266 1144 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 TROAPQ12815 778 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
SPIDR-206ENST00000518074 MYRIPQ8NFW9 859 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 SH3TC2Q8TF17 1288 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 SOCS4Q8WXH5 440 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 EPSTI1Q96J88 318 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 ZNF287Q9HBT7 754 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 FBXO2Q9UK22 296 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-206ENST00000518074 SYNPO2Q9UMS6 1093 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 TMX2Q9Y320 296 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 PLXNB2O15031 1838 aa12.39□□□□□ -0.43
SPIDR-206ENST00000518074 GJB1P08034 283 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 XRCC5P13010 732 aaKnown RBP12.38□□□□□ -0.43
SPIDR-206ENST00000518074 VCAM1P19320 739 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 KRT2P35908 639 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 CCNA1P78396 465 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 PDE4BQ07343 736 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 ACER1Q8TDN7 264 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 KANSL2Q9H9L4 492 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.38□□□□□ -0.43
SPIDR-206ENST00000518074 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 ADAMTS3O15072 1205 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 TERF1P54274 439 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 NLRP5P59047 1200 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 ERVK-9P63128 1117 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 ERVK-24P63145 666 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 FANCCQ00597 558 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 NCAPHQ15003 741 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 TSHZ1Q6ZSZ6 1077 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 RNF26Q9BY78 433 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-206ENST00000518074 FANCLQ9NW38 375 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 HOXC10Q9NYD6 342 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 KLHL10Q6JEL2 608 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 EP400NLQ6ZTU2 488 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 PIK3AP1Q6ZUJ8 805 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 GPKOWQ92917 476 aaPredicted RBP eCLIP12.38□□□□□ -0.43
SPIDR-206ENST00000518074 STX8Q9UNK0 236 aa12.38□□□□□ -0.43
SPIDR-206ENST00000518074 A0A0G2JMZ2 1700 aa12.37□□□□□ -0.43
SPIDR-206ENST00000518074 VWA3AA6NCI4 1184 aa12.37□□□□□ -0.43
SPIDR-206ENST00000518074 MPHOSPH10O00566 681 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms