RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 PCDHA8Q9Y5H6 950 aa13.58□□□□□ -0.24
AP3B1-203ENST00000517940 DOCK5Q9H7D0 1870 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 ADCY6O43306 1168 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 RGS20O76081 388 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 PTGS1P23219 599 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 CYP2C19P33261 490 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 DDIT3P35638 169 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 UBXN2AP68543 259 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 MRPS9P82933 396 aaKnown RBP13.57□□□□□ -0.24
AP3B1-203ENST00000517940 TRAF1Q13077 416 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 PKP1Q13835 747 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 TMEM63BQ5T3F8 832 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 JAKMIP3Q5VZ66 844 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 ZNF467Q7Z7K2 595 aaPredicted RBP13.57□□□□□ -0.24
AP3B1-203ENST00000517940 FCHSD1Q86WN1 690 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 CCAR1Q8IX12 1150 aaKnown RBP13.57□□□□□ -0.24
AP3B1-203ENST00000517940 BLIDQ8IZY5 108 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 FAM177A1Q8N128 213 aaPredicted RBP13.57□□□□□ -0.24
AP3B1-203ENST00000517940 SAMD3Q8N6K7 520 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 CCDC148Q8NFR7 591 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 ZFP91Q96JP5 570 aaPredicted RBP13.57□□□□□ -0.24
AP3B1-203ENST00000517940 PDCD2LQ9BRP1 358 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 ANO3Q9BYT9 981 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 MAP3K20Q9NYL2 800 aaKnown RBP13.57□□□□□ -0.24
AP3B1-203ENST00000517940 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
AP3B1-203ENST00000517940 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
AP3B1-203ENST00000517940 BTBD18B2RXH4 712 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 ADCY3O60266 1144 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 EIF2AK2P19525 551 aaKnown RBP13.56□□□□□ -0.24
AP3B1-203ENST00000517940 PRMT2P55345 433 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 NLRP5P59047 1200 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 PGM5Q15124 567 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 ARMCX2Q7L311 632 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 DPP9Q86TI2 863 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 REXO1Q8N1G1 1221 aaKnown RBP13.56□□□□□ -0.24
AP3B1-203ENST00000517940 DNERQ8NFT8 737 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 SH3TC2Q8TF17 1288 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 WASF1Q92558 559 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 C8orf76Q96K31 380 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 RMDN3Q96TC7 470 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 MYH15Q9Y2K3 1946 aa13.56□□□□□ -0.24
AP3B1-203ENST00000517940 POTEFA5A3E0 1075 aa13.55□□□□□ -0.24
AP3B1-203ENST00000517940 ZNF865P0CJ78 1059 aaPredicted RBP13.55□□□□□ -0.24
AP3B1-203ENST00000517940 SYT1P21579 422 aa13.55□□□□□ -0.24
AP3B1-203ENST00000517940 SREBF1P36956 1147 aa13.55□□□□□ -0.24
AP3B1-203ENST00000517940 MRPL12P52815 198 aaKnown RBP13.55□□□□□ -0.24
AP3B1-203ENST00000517940 SEMA3FQ13275 785 aa13.55□□□□□ -0.24
AP3B1-203ENST00000517940 PRAMEF19Q5SWL8 479 aa13.55□□□□□ -0.24
AP3B1-203ENST00000517940 FBXO46Q6PJ61 603 aaPredicted RBP13.55□□□□□ -0.24
AP3B1-203ENST00000517940 DIS3L2Q8IYB7 885 aaKnown RBP13.55□□□□□ -0.24
AP3B1-203ENST00000517940 PXYLP1Q8TE99 480 aa13.55□□□□□ -0.24
AP3B1-203ENST00000517940 CCDC12Q8WUD4 166 aaPredicted RBP13.55□□□□□ -0.24
AP3B1-203ENST00000517940 TINF2Q9BSI4 451 aa13.55□□□□□ -0.24
AP3B1-203ENST00000517940 CWC22Q9HCG8 908 aaKnown RBP13.55□□□□□ -0.24
AP3B1-203ENST00000517940 C6orf50Q9HD87 102 aa13.55□□□□□ -0.24
AP3B1-203ENST00000517940 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.55□□□□□ -0.24
AP3B1-203ENST00000517940 SYNGAP1Q96PV0 1343 aa13.55□□□□□ -0.24
AP3B1-203ENST00000517940 NR3C2P08235 984 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 CYBAP13498 195 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 HOXD10P28358 340 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 GNA11P29992 359 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 CACNB2Q08289 660 aaPredicted RBP13.54□□□□□ -0.24
AP3B1-203ENST00000517940 AP3B2Q13367 1082 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 COL13A1Q5TAT6 717 aaPredicted RBP13.54□□□□□ -0.24
AP3B1-203ENST00000517940 TAPT1Q6NXT6 567 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 VSIG10LQ86VR7 867 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 TEX2Q8IWB9 1127 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 FBXO16Q8IX29 292 aaPredicted RBP13.54□□□□□ -0.24
AP3B1-203ENST00000517940 FAM184AQ8NB25 1140 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 CYP2W1Q8TAV3 490 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 RAET1EQ8TD07 263 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 LENG9Q96B70 501 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 MCOLN1Q9GZU1 580 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 PDGFCQ9NRA1 345 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 MTMR6Q9Y217 621 aa13.54□□□□□ -0.24
AP3B1-203ENST00000517940 ARIH2O95376 493 aa13.53□□□□□ -0.24
AP3B1-203ENST00000517940 INHAP05111 366 aa13.53□□□□□ -0.24
AP3B1-203ENST00000517940 ITGB5P18084 799 aa13.53□□□□□ -0.24
AP3B1-203ENST00000517940 U2AF2P26368 475 aaKnown RBP eCLIP13.53□□□□□ -0.242e-6■■□□□ 13.5
AP3B1-203ENST00000517940 CCND3P30281 292 aaPredicted RBP13.53□□□□□ -0.24
AP3B1-203ENST00000517940 GRK4P32298 578 aa13.53□□□□□ -0.24
AP3B1-203ENST00000517940 KRT2P35908 639 aa13.53□□□□□ -0.24
AP3B1-203ENST00000517940 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
AP3B1-203ENST00000517940 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
AP3B1-203ENST00000517940 NSUN6Q8TEA1 469 aaKnown RBP13.53□□□□□ -0.24
AP3B1-203ENST00000517940 LENG1Q96BZ8 264 aaPredicted RBP13.53□□□□□ -0.24
AP3B1-203ENST00000517940 ZDHHC9Q9Y397 364 aa13.53□□□□□ -0.24
AP3B1-203ENST00000517940 IGLV3-22A0A075B6J6 115 aa13.52□□□□□ -0.25
AP3B1-203ENST00000517940 LOC102724159A0A0B4J2E5 919 aa13.52□□□□□ -0.25
AP3B1-203ENST00000517940 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.52□□□□□ -0.25
AP3B1-203ENST00000517940 FAM86B1E9PN63 330 aa13.52□□□□□ -0.25
AP3B1-203ENST00000517940 HMGCRP04035 888 aa13.52□□□□□ -0.25
AP3B1-203ENST00000517940 FAM86B2P0C5J1 330 aa13.52□□□□□ -0.25
AP3B1-203ENST00000517940 ARHGAP4P98171 946 aa13.52□□□□□ -0.25
AP3B1-203ENST00000517940 PWP2Q15269 919 aaKnown RBP13.52□□□□□ -0.25
AP3B1-203ENST00000517940 MTFR1Q15390 333 aa13.52□□□□□ -0.25
AP3B1-203ENST00000517940 ARHGEF16Q5VV41 709 aa13.52□□□□□ -0.25
AP3B1-203ENST00000517940 PCNX4Q63HM2 1172 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms