RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 GPNMBQ14956 572 aa13.43□□□□□ -0.26
CTNNA1-205ENST00000517904 GPATCH3Q96I76 525 aa13.43□□□□□ -0.26
CTNNA1-205ENST00000517904 CTAGE1Q96RT6 745 aa13.43□□□□□ -0.26
CTNNA1-205ENST00000517904 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
CTNNA1-205ENST00000517904 LOC102724159A0A0B4J2E5 919 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 PTPDC1A2A3K4 754 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 KIF28PB7ZC32 967 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 GPR37L1O60883 481 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 BAIAP3O94812 1187 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 EDNRBP24530 442 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 CALML3P27482 149 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 PPP2R5BQ15173 497 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 PWP2Q15269 919 aaKnown RBP13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 CCDC96Q2M329 555 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 PPP4R3BQ5MIZ7 849 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 ZMYM1Q5SVZ6 1142 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 C20orf194Q5TEA3 1177 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 BTNL9Q6UXG8 535 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 RETREG2Q8NC44 543 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 GDPD5Q8WTR4 605 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 DCAF4Q8WV16 495 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 CLEC4DQ8WXI8 215 aa13.42□□□□□ -0.26
CTNNA1-205ENST00000517904 ARIH2O95376 493 aa13.41□□□□□ -0.26
CTNNA1-205ENST00000517904 WDR5P61964 334 aaKnown RBP13.41□□□□□ -0.26
CTNNA1-205ENST00000517904 PTPN11Q06124 597 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-205ENST00000517904 BFSP2Q13515 415 aa13.41□□□□□ -0.26
CTNNA1-205ENST00000517904 TCTN1Q2MV58 587 aa13.41□□□□□ -0.26
CTNNA1-205ENST00000517904 BRDTQ58F21 947 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-205ENST00000517904 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
CTNNA1-205ENST00000517904 CHMP4BQ9H444 224 aaKnown RBP13.41□□□□□ -0.26
CTNNA1-205ENST00000517904 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
CTNNA1-205ENST00000517904 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 RAD50Q92878 1312 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 NKRFO15226 690 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 RANBP6O60518 1105 aaKnown RBP13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 KCNJ6P48051 423 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 RPS6P62753 249 aaKnown RBP13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 DEFB103AP81534 67 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 PDE4DQ08499 809 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 PTGISQ16647 500 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 RNF207Q6ZRF8 634 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 PI4K2BQ8TCG2 481 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 SCFD2Q8WU76 684 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 DHX38Q92620 1227 aaKnown RBP13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 MTUS1Q9ULD2 1270 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 NOD1Q9Y239 953 aa13.4□□□□□ -0.26
CTNNA1-205ENST00000517904 PI4K2BG5E9Z4 385 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 KPNA6O60684 536 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 TXNP10599 105 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 CHMP4BP1P59074 171 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 LRRFIP1Q32MZ4 808 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 VPS53Q5VIR6 699 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 GDF6Q6KF10 455 aaPredicted RBP13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 CAGE1Q8TC20 777 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 OTUD7AQ8TE49 926 aaPredicted RBP13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 AFAP1L1Q8TED9 768 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 TMEM47Q9BQJ4 181 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 FSD1Q9BTV5 496 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 SUGCTQ9HAC7 445 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 GPCPD1Q9NPB8 672 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 SIP14410 1827 aa13.39□□□□□ -0.27
CTNNA1-205ENST00000517904 ORC4O43929 436 aa13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 NBNO60934 754 aa13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 FGRP09769 529 aa13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 CCDC62Q6P9F0 684 aa13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 DNERQ8NFT8 737 aa13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 KAT2BQ92831 832 aa13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 ZBED2Q9BTP6 218 aa13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 UBE2ZQ9H832 354 aaPredicted RBP13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 ANAPC4Q9UJX5 808 aa13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 TTC41PQ6P2S7 1318 aa13.38□□□□□ -0.27
CTNNA1-205ENST00000517904 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 LINC01553A4QN01 128 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 GJB5O95377 273 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 CXCL10P02778 98 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 MMP3P08254 477 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 PDHBP11177 359 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 SELPP16109 830 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 RBL2Q08999 1139 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 CNKSR3Q6P9H4 555 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 LRRC8DQ7L1W4 858 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 SESTD1Q86VW0 696 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 FAM178BQ8IXR5 827 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 CCDC155Q8N6L0 562 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 AFG1LQ8WV93 481 aa13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
CTNNA1-205ENST00000517904 USP34Q70CQ2 3546 aa13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 TOP1P11387 765 aaKnown RBP13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 CKBP12277 381 aa13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 ERVK-21P61565 698 aa13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 ARHGAP1Q07960 439 aa13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 TRAF7Q6Q0C0 670 aa13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 TGS1Q96RS0 853 aaKnown RBP13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 MPHOSPH6Q99547 160 aaKnown RBP13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 RAD9AQ99638 391 aa13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 WDR19Q8NEZ3 1342 aa13.36□□□□□ -0.27
CTNNA1-205ENST00000517904 KIAA1217Q5T5P2 1943 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 PRR33A8MZF0 331 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms