RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SEMA6CQ9H3T2 930 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 VIPAS39Q9H9C1 493 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 ACTR5Q9H9F9 607 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 KIF9Q9HAQ2 790 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 KLC4Q9NSK0 619 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 MAGEC2Q9UBF1 373 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 DNAI1Q9UI46 699 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 CORO1CQ9ULV4 474 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 GMEB1Q9Y692 573 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 RAPGEF2Q9Y4G8 1499 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 RUSC2Q8N2Y8 1516 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 GAPVD1Q14C86 1478 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 F8VZ95 297 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 EXOC5O00471 708 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 TREHO43280 583 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZSCAN12O43309 604 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 CBFA2T2O43439 604 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 CREB3O43889 395 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 TBC1D8O95759 1140 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 NFICP08651 508 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 DESP17661 470 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 PTGS1P23219 599 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 FLT3P36888 993 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 TRPC1P48995 793 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 NLRP5P59047 1200 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 AKAP17AQ02040 695 aaKnown RBP5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 DSC3Q14574 896 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 POU4F3Q15319 338 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 ENOX2Q16206 610 aaKnown RBP5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 TBC1D10BQ4KMP7 808 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 MFSD4BQ5TF39 518 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 CWF19L1Q69YN2 538 aaKnown RBP5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 C16orf87Q6PH81 154 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 MTHFD1LQ6UB35 978 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 PI16Q6UXB8 463 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 SEZ6L2Q6UXD5 910 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 GET4Q7L5D6 327 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 CATIPQ7Z7H3 387 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 LRRC8AQ8IWT6 810 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCDC65Q8IXS2 484 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 C17orf53Q8N3J3 647 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 AFAP1Q8N556 730 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 C3orf20Q8ND61 904 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 OR8K1Q8NGG5 319 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 B4GALNT2Q8NHY0 566 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 UIMC1Q96RL1 719 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 TCHPQ9BT92 498 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 TRIM5Q9C035 493 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 TRIM4Q9C037 500 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 BHMT2Q9H2M3 363 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 ACSS3Q9H6R3 686 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 ST7Q9NRC1 585 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 FAM105AQ9NUU6 356 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZNHIT6Q9NWK9 470 aaKnown RBP5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 NLRP2Q9NX02 1062 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 SPATA7Q9P0W8 599 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 VPS18Q9P253 973 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 HOOK1Q9UJC3 728 aaKnown RBP5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 BARX2Q9UMQ3 279 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 DAAM1Q9Y4D1 1078 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 FAM169AQ9Y6X4 670 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZNF521Q96K83 1311 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 PLXNC1O60486 1568 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 HECW1Q76N89 1606 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 PTPN23Q9H3S7 1636 aa5.41□□□□□ -1.54
HMGB1P19-201ENST00000517578 KIF21AQ7Z4S6 1674 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 NAIPQ13075 1403 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 EIF4EBP3O60516 100 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 KRT38O76015 456 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 B3GALT4O96024 378 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 CYP11A1P05108 521 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 VIL1P09327 827 aaKnown RBP5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 FAM163BP0C2L3 166 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 IDO1P14902 403 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 RAB6AP20340 208 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 CNGA1P29973 690 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZNF75DP51815 510 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 IFT88Q13099 833 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 SOGA3Q5TF21 947 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 CDCA2Q69YH5 1023 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 OGFOD2Q6N063 350 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 SARM1Q6SZW1 724 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 CRELD2Q6UXH1 353 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 DNAJC14Q6Y2X3 702 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZNF765Q7L2R6 523 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 PLA2G4DQ86XP0 818 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 TP53INP2Q8IXH6 220 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 RPAP2Q8IXW5 612 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCAR2Q8N163 923 aaKnown RBP5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 PDILTQ8N807 584 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 SPC24Q8NBT2 197 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 ERMNQ8TAM6 284 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 WDR66Q8TBY9 1149 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 AFAP1L1Q8TED9 768 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 DYDC1Q8WWB3 177 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 GOLGA1Q92805 767 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 TMX3Q96JJ7 454 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 ASB16Q96NS5 453 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 SPAG5Q96R06 1193 aa5.4□□□□□ -1.54
HMGB1P19-201ENST00000517578 TSC22D3Q99576 134 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms