RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 SNX17Q15036 470 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 TRIM60Q495X7 471 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 DUSP28Q4G0W2 176 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 TAPT1Q6NXT6 567 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 SGMS1Q86VZ5 419 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 MICU3Q86XE3 530 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 FANCBQ8NB91 859 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 OR6J1Q8NGC5 347 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 SYTL5Q8TDW5 730 aaPredicted RBP8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 PIBF1Q8WXW3 757 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 MYL10Q9BUA6 226 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 SEZ6LQ9BYH1 1024 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 LRRC2Q9BYS8 371 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 UBE2OQ9C0C9 1292 aaKnown RBP8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 PDGFCQ9NRA1 345 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 RBM28Q9NW13 759 aaKnown RBP8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 NAP1L2Q9ULW6 460 aaPredicted RBP8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 GNEQ9Y223 722 aaKnown RBP8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 ASTN1O14525 1302 aa8.24□□□□□ -1.09
SCARNA18.2-201ENST00000516882 WDR81Q562E7 1941 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 MYADML2A6NDP7 307 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 ZBTB43O43298 467 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 ADCY6O43306 1168 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 EPB41L2O43491 1005 aaKnown RBP8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 CYTH3O43739 400 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 EIF3JO75822 258 aaKnown RBP8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 CLTBP09497 229 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 TXNP10599 105 aaKnown RBP8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 RAG1P15918 1043 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 EIF2AK2P19525 551 aaKnown RBP8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 RXRAP19793 462 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 EDNRBP24530 442 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 HSD17B4P51659 736 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 BEX3Q00994 111 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 TLE2Q04725 743 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 BLOC1S2Q6QNY1 142 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 SEPT14Q6ZU15 432 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 FCHSD1Q86WN1 690 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 SMARCC2Q8TAQ2 1214 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 TBC1D5Q92609 795 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 JAKMIP1Q96N16 626 aaKnown RBP8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 TOX2Q96NM4 488 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 TAAR1Q96RJ0 339 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 GDF15Q99988 308 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 PXMP2Q9NR77 195 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 TMEM39AQ9NV64 488 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 POLR3EQ9NVU0 708 aa8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 DDX49Q9Y6V7 483 aaKnown RBP8.23□□□□□ -1.09
SCARNA18.2-201ENST00000516882 CCDC196A0A1B0GTZ2 297 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 RBM47A0AV96 593 aaKnown RBP8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 ARVCFO00192 962 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 KPNA6O60684 536 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 PPP1R11O60927 126 aaPredicted RBP8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 NR3C2P08235 984 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 MYCLP12524 364 aaPredicted RBP8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 CCND2P30279 289 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 HOXA13P31271 388 aaPredicted RBP8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 HSPA4P34932 840 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 NKX3-2P78367 333 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 RTN1Q16799 776 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 ADCK5Q3MIX3 580 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 CCSAPQ6IQ19 270 aaPredicted RBP8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 KCNV1Q6PIU1 500 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 APOA5Q6Q788 366 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 CXCL17Q6UXB2 119 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 ANKRD33Q7Z3H0 272 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 RASEFQ8IZ41 740 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 TDHQ8IZJ6 230 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 CCDC82Q8N4S0 544 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 MRVI1Q9Y6F6 885 aa8.22□□□□□ -1.09
SCARNA18.2-201ENST00000516882 SCN5AQ14524 2016 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 KLF18A0A0U1RQI7 1052 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 GOLGA8AA7E2F4 631 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 GOLGA8BA8MQT2 603 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 STAM2O75886 525 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 PLEKHA8P1O95397 391 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 GH1P01241 217 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 MYL3P08590 195 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 CASTP20810 708 aaKnown RBP8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 RCAN1P53805 252 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 EXOSC10Q01780 885 aaKnown RBP8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 GHRHRQ02643 423 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 ITGA7Q13683 1181 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 PGM5Q15124 567 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 GNPTABQ3T906 1256 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 Q6ZUG5 572 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 TMTC3Q6ZXV5 915 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 RAB11FIP4Q86YS3 637 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 CMTR1Q8N1G2 835 aaKnown RBP8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 SRBD1Q8N5C6 995 aaKnown RBP8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 TCEANC2Q96MN5 208 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 PDCD2LQ9BRP1 358 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 PSTPIP2Q9H939 334 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 EHMT1Q9H9B1 1298 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 PDLIM7Q9NR12 457 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 COL20A1Q9P218 1284 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 SNX14Q9Y5W7 946 aa8.21□□□□□ -1.1
SCARNA18.2-201ENST00000516882 GBF1Q92538 1859 aa8.2□□□□□ -1.1
SCARNA18.2-201ENST00000516882 SPDYE3A6NKU9 549 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms