RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SLC24A1O60721 1099 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 LGR5O75473 907 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 MMP1P03956 469 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 CYP2C9P11712 490 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 AKR1A1P14550 325 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 COL8A1P27658 744 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 HTRA4P83105 476 aaPredicted RBP4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 NFKB2Q00653 900 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 RHDQ02161 417 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 SRSF5Q13243 272 aaKnown RBP4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 LRRC69Q6ZNQ3 347 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 TAOK1Q7L7X3 1001 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 AEBP1Q8IUX7 1158 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 PLCD3Q8N3E9 789 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 PCSK9Q8NBP7 692 aaKnown RBP4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 VN1R2Q8NFZ6 395 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 C11orf84Q9BUA3 381 aaPredicted RBP4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 GPR108Q9NPR9 543 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 PRMT8Q9NR22 394 aaPredicted RBP4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 CENPEQ02224 2701 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 ROBO3Q96MS0 1386 aa4.27□□□□□ -1.73
SCARNA13-201ENST00000516672 NLRC5Q86WI3 1866 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 KIF26AQ9ULI4 1882 aaPredicted RBP4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 C5orf67F2Z3F1 127 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 KCNQ3O43525 872 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 C6orf222P0C671 652 aaPredicted RBP4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 IQCF3P0C7M6 154 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 TAL1P17542 331 aaPredicted RBP4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 CST5P28325 142 aaPredicted RBP4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 EIF2S3P41091 472 aaKnown RBP4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 NRLP54845 237 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 HMGCS2P54868 508 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 TNFAIP2Q03169 654 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 ADCY1Q08828 1119 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 CAMK1Q14012 370 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 SF3B3Q15393 1217 aaKnown RBP4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 C1QL3Q5VWW1 255 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 SYCE2Q6PIF2 218 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 GIGYF2Q6Y7W6 1299 aaKnown RBP4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 FAM83AQ86UY5 434 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 ATP8B4Q8TF62 1192 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 SLC32A1Q9H598 525 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 KCNK12Q9HB15 430 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 CYP26B1Q9NR63 512 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 ARHGEF3Q9NR81 526 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 DKK3Q9UBP4 350 aa4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 DBF4Q9UBU7 674 aaPredicted RBP4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 TRMT112Q9UI30 125 aaKnown RBP4.26□□□□□ -1.73
SCARNA13-201ENST00000516672 IL16Q14005 1332 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 CUBNO60494 3623 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 PLXNB3Q9ULL4 1909 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 SMCHD1A6NHR9 2005 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 PPFIA3O75145 1194 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 TDGF1P13385 188 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 ADORA2AP29274 412 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 TECP42680 631 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 ITGA7Q13683 1181 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 TCTN1Q2MV58 587 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 PLA2G2CQ5R387 149 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 ANKRD54Q6NXT1 300 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 CMTR1Q8N1G2 835 aaKnown RBP4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 CMASQ8NFW8 434 aaPredicted RBP4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 GPR152Q8TDT2 470 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 KLHL5Q96PQ7 755 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 SEC31BQ9NQW1 1179 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 SERPINA10Q9UK55 444 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 ITGB1BP2Q9UKP3 347 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 U3KPZ7 1027 aaPredicted RBP4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 ICE1Q9Y2F5 2266 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 ZNF236Q9UL36 1845 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 UBR4Q5T4S7 5183 aa4.25□□□□□ -1.73
SCARNA13-201ENST00000516672 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 WIPF3A6NGB9 483 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 PHF20L1A8MW92 1017 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 KIAA1324LA8MWY0 1029 aaPredicted RBP4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 ATP5J2-PTCD1G3V325 749 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 PER2O15055 1255 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 SUV39H1O43463 412 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 COBLO75128 1261 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 ZMYND10O75800 440 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 EPN2O95208 641 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 RB1P06400 928 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 ZNF865P0CJ78 1059 aaPredicted RBP4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 DNAJB1P25685 340 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 ZEB1P37275 1124 aaPredicted RBP4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 CCNA1P78396 465 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 TLE1Q04724 770 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 SPP2Q13103 211 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 NOLC1Q14978 699 aaKnown RBP eCLIP4.24□□□□□ -1.731e-323■■■■■ 45.6
SCARNA13-201ENST00000516672 ZNF423Q2M1K9 1284 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 UAP1L1Q3KQV9 507 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 PKDCCQ504Y2 493 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 CNKSR3Q6P9H4 555 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 DCLRE1AQ6PJP8 1040 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 NECTIN4Q96NY8 510 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 YME1L1Q96TA2 773 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 TLE6Q9H808 572 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 GPCPD1Q9NPB8 672 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 NRBP1Q9UHY1 535 aa4.24□□□□□ -1.73
SCARNA13-201ENST00000516672 DENND2AQ9ULE3 1009 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms