RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 TM6SF1Q9BZW5 370 aa22.39■■□□□ 1.17
LMNA-225ENST00000515824 AP5M1Q9H0R1 490 aa22.39■■□□□ 1.17
LMNA-225ENST00000515824 UPF3AQ9H1J1 476 aaKnown RBP22.39■■□□□ 1.17
LMNA-225ENST00000515824 Q9Y3F1 56 aa22.39■■□□□ 1.17
LMNA-225ENST00000515824 CCDC196A0A1B0GTZ2 297 aa22.38■■□□□ 1.17
LMNA-225ENST00000515824 RBM47A0AV96 593 aaKnown RBP22.38■■□□□ 1.17
LMNA-225ENST00000515824 MOXD2PA6NHM9 499 aa22.38■■□□□ 1.17
LMNA-225ENST00000515824 CST5P28325 142 aaPredicted RBP22.38■■□□□ 1.17
LMNA-225ENST00000515824 HOXA13P31271 388 aaPredicted RBP22.38■■□□□ 1.17
LMNA-225ENST00000515824 KCNA10Q16322 511 aa22.38■■□□□ 1.17
LMNA-225ENST00000515824 SLC39A5Q6ZMH5 540 aa22.38■■□□□ 1.17
LMNA-225ENST00000515824 C7orf61Q8IZ16 206 aa22.38■■□□□ 1.17
LMNA-225ENST00000515824 AGXT2Q9BYV1 514 aa22.38■■□□□ 1.17
LMNA-225ENST00000515824 PXMP2Q9NR77 195 aa22.38■■□□□ 1.17
LMNA-225ENST00000515824 LCTP09848 1927 aa22.37■■□□□ 1.17
LMNA-225ENST00000515824 DYNC1LI2O43237 492 aaPredicted RBP22.37■■□□□ 1.17
LMNA-225ENST00000515824 EIF2AK2P19525 551 aaKnown RBP22.37■■□□□ 1.17
LMNA-225ENST00000515824 METAP2P50579 478 aaKnown RBP eCLIP22.37■■□□□ 1.17
LMNA-225ENST00000515824 ACLYP53396 1101 aa22.37■■□□□ 1.17
LMNA-225ENST00000515824 NKX3-2P78367 333 aa22.37■■□□□ 1.17
LMNA-225ENST00000515824 DUSP28Q4G0W2 176 aa22.37■■□□□ 1.17
LMNA-225ENST00000515824 TLK2Q86UE8 772 aa22.37■■□□□ 1.17
LMNA-225ENST00000515824 SCFD2Q8WU76 684 aa22.37■■□□□ 1.17
LMNA-225ENST00000515824 CUL5Q93034 780 aa22.37■■□□□ 1.17
LMNA-225ENST00000515824 A0A1W2PQ45 241 aaPredicted RBP22.36■■□□□ 1.17
LMNA-225ENST00000515824 A0A1W2PQY0 241 aa22.36■■□□□ 1.17
LMNA-225ENST00000515824 hCG_1642624A0A1W2PR95 340 aa22.36■■□□□ 1.17
LMNA-225ENST00000515824 MYADML2A6NDP7 307 aa22.36■■□□□ 1.17
LMNA-225ENST00000515824 NR3C2P08235 984 aa22.36■■□□□ 1.17
LMNA-225ENST00000515824 CCSAPQ6IQ19 270 aaPredicted RBP22.36■■□□□ 1.17
LMNA-225ENST00000515824 FCHSD1Q86WN1 690 aa22.36■■□□□ 1.17
LMNA-225ENST00000515824 NKRFO15226 690 aaKnown RBP eCLIP22.35■■□□□ 1.17
LMNA-225ENST00000515824 ZEB2O60315 1214 aa22.35■■□□□ 1.17
LMNA-225ENST00000515824 EIF3JO75822 258 aaKnown RBP22.35■■□□□ 1.17
LMNA-225ENST00000515824 ASGR1P07306 291 aa22.35■■□□□ 1.17
LMNA-225ENST00000515824 IRX5P78411 483 aaPredicted RBP22.35■■□□□ 1.17
LMNA-225ENST00000515824 TTLL4Q14679 1199 aa22.35■■□□□ 1.17
LMNA-225ENST00000515824 SMARCC2Q8TAQ2 1214 aa22.35■■□□□ 1.17
LMNA-225ENST00000515824 GLT1D1Q96MS3 346 aa22.35■■□□□ 1.17
LMNA-225ENST00000515824 STARD7Q9NQZ5 370 aa22.35■■□□□ 1.17
LMNA-225ENST00000515824 FAM217BQ9NTX9 383 aaPredicted RBP22.35■■□□□ 1.17
LMNA-225ENST00000515824 V9GY48 417 aaPredicted RBP22.35■■□□□ 1.17
LMNA-225ENST00000515824 TXNP10599 105 aaKnown RBP22.34■■□□□ 1.17
LMNA-225ENST00000515824 CDC27P30260 824 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 ADD1P35611 737 aaKnown RBP22.34■■□□□ 1.17
LMNA-225ENST00000515824 RTP1P59025 263 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 ANAPC15P60006 121 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 FUT2Q10981 343 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 FSCN1Q16658 493 aaKnown RBP22.34■■□□□ 1.17
LMNA-225ENST00000515824 TMEM63BQ5T3F8 832 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 C1orf53Q5VUE5 145 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 SEPT14Q6ZU15 432 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 HEATR3Q7Z4Q2 680 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 VTI1AQ96AJ9 217 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 PDCD2LQ9BRP1 358 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 PSTPIP2Q9H939 334 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 ATP11BQ9Y2G3 1177 aa22.34■■□□□ 1.17
LMNA-225ENST00000515824 CNTNAP5Q8WYK1 1306 aa22.33■■□□□ 1.17
LMNA-225ENST00000515824 PIK3CDO00329 1044 aa22.33■■□□□ 1.17
LMNA-225ENST00000515824 CTAGE5O15320 804 aa22.33■■□□□ 1.17
LMNA-225ENST00000515824 MYCLP12524 364 aaPredicted RBP22.33■■□□□ 1.17
LMNA-225ENST00000515824 EVCP57679 992 aa22.33■■□□□ 1.17
LMNA-225ENST00000515824 BEX3Q00994 111 aa22.33■■□□□ 1.17
LMNA-225ENST00000515824 SNX17Q15036 470 aa22.33■■□□□ 1.17
LMNA-225ENST00000515824 UPF3BQ9BZI7 483 aaKnown RBP22.33■■□□□ 1.17
LMNA-225ENST00000515824 ZMYND8Q9ULU4 1186 aaPredicted RBP22.33■■□□□ 1.17
LMNA-225ENST00000515824 ELP1O95163 1332 aa22.32■■□□□ 1.16
LMNA-225ENST00000515824 PGM5Q15124 567 aa22.32■■□□□ 1.16
LMNA-225ENST00000515824 USP17L6PQ6QN14 398 aa22.32■■□□□ 1.16
LMNA-225ENST00000515824 VSIG10LQ86VR7 867 aa22.32■■□□□ 1.16
LMNA-225ENST00000515824 OR6J1Q8NGC5 347 aa22.32■■□□□ 1.16
LMNA-225ENST00000515824 PDRG1Q9NUG6 133 aa22.32■■□□□ 1.16
LMNA-225ENST00000515824 MEIS2O14770 477 aa22.31■■□□□ 1.16
LMNA-225ENST00000515824 CABYRO75952 493 aa22.31■■□□□ 1.16
LMNA-225ENST00000515824 PTGS1P23219 599 aa22.31■■□□□ 1.16
LMNA-225ENST00000515824 PDIA3P30101 505 aaKnown RBP22.31■■□□□ 1.16
LMNA-225ENST00000515824 CCND2P30279 289 aa22.31■■□□□ 1.16
LMNA-225ENST00000515824 CPT1AP50416 773 aa22.31■■□□□ 1.16
LMNA-225ENST00000515824 TOB2Q14106 344 aaPredicted RBP22.31■■□□□ 1.16
LMNA-225ENST00000515824 TRIM60Q495X7 471 aa22.31■■□□□ 1.16
LMNA-225ENST00000515824 BRDTQ58F21 947 aaPredicted RBP22.31■■□□□ 1.16
LMNA-225ENST00000515824 LRRC37A2A6NM11 1700 aa22.31■■□□□ 1.16
LMNA-225ENST00000515824 NID2Q14112 1375 aa22.3■■□□□ 1.16
LMNA-225ENST00000515824 hCG_1984214I3L0E3 225 aa22.3■■□□□ 1.16
LMNA-225ENST00000515824 SYN1P17600 705 aa22.3■■□□□ 1.16
LMNA-225ENST00000515824 WWC2Q6AWC2 1192 aa22.3■■□□□ 1.16
LMNA-225ENST00000515824 CCDC62Q6P9F0 684 aa22.3■■□□□ 1.16
LMNA-225ENST00000515824 KCNV1Q6PIU1 500 aa22.3■■□□□ 1.16
LMNA-225ENST00000515824 ZNF713Q8N859 430 aaPredicted RBP22.3■■□□□ 1.16
LMNA-225ENST00000515824 GPKOWQ92917 476 aaPredicted RBP eCLIP22.3■■□□□ 1.161e-9■■■■□ 23.2
LMNA-225ENST00000515824 PRKAG2Q9UGJ0 569 aa22.3■■□□□ 1.16
LMNA-225ENST00000515824 CEP290O15078 2479 aa22.29■■□□□ 1.16
LMNA-225ENST00000515824 ARIH2O95376 493 aa22.29■■□□□ 1.16
LMNA-225ENST00000515824 NAPAP54920 295 aa22.29■■□□□ 1.16
LMNA-225ENST00000515824 AKAP17AQ02040 695 aaKnown RBP22.29■■□□□ 1.16
LMNA-225ENST00000515824 PPP1R18Q6NYC8 613 aa22.29■■□□□ 1.16
LMNA-225ENST00000515824 CXCL17Q6UXB2 119 aa22.29■■□□□ 1.16
LMNA-225ENST00000515824 COPS5Q92905 334 aa22.29■■□□□ 1.16
LMNA-225ENST00000515824 ZNF274Q96GC6 653 aaPredicted RBP22.29■■□□□ 1.16
LMNA-225ENST00000515824 RBM27Q9P2N5 1060 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms