RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 FTOQ9C0B1 505 aaKnown RBP eCLIP18.55■□□□□ 0.56
LMNA-223ENST00000515459 TCP11L1Q9NUJ3 509 aa18.55■□□□□ 0.56
LMNA-223ENST00000515459 COG5Q9UP83 839 aa18.55■□□□□ 0.56
LMNA-223ENST00000515459 B4DLN1 442 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 EDNRBP24530 442 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 PLA2G5P39877 138 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 MRPL12P52815 198 aaKnown RBP18.54■□□□□ 0.56
LMNA-223ENST00000515459 RPS6P62753 249 aaKnown RBP18.54■□□□□ 0.56
LMNA-223ENST00000515459 TAP1Q03518 808 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 ALX1Q15699 326 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 RRP12Q5JTH9 1297 aaKnown RBP18.54■□□□□ 0.56
LMNA-223ENST00000515459 HERC6Q8IVU3 1022 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 PPP1R13LQ8WUF5 828 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 ARNTL2Q8WYA1 636 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 NOD1Q9Y239 953 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 REV3LO60673 3130 aa18.54■□□□□ 0.56
LMNA-223ENST00000515459 TRIP12Q14669 1992 aaPredicted RBP18.53■□□□□ 0.56
LMNA-223ENST00000515459 WDR19Q8NEZ3 1342 aa18.53■□□□□ 0.56
LMNA-223ENST00000515459 EPOPA6NHQ4 379 aa18.53■□□□□ 0.56
LMNA-223ENST00000515459 BAIAP3O94812 1187 aa18.53■□□□□ 0.56
LMNA-223ENST00000515459 TXNP10599 105 aaKnown RBP18.53■□□□□ 0.56
LMNA-223ENST00000515459 PDHBP11177 359 aa18.53■□□□□ 0.56
LMNA-223ENST00000515459 COPS5Q92905 334 aa18.53■□□□□ 0.56
LMNA-223ENST00000515459 FAM122AQ96E09 287 aa18.53■□□□□ 0.56
LMNA-223ENST00000515459 HELLSQ9NRZ9 838 aa18.53■□□□□ 0.56
LMNA-223ENST00000515459 TRANK1O15050 2925 aa18.53■□□□□ 0.56
LMNA-223ENST00000515459 PTPRSQ13332 1948 aa18.53■□□□□ 0.56
LMNA-223ENST00000515459 XIRP2A4UGR9 3374 aa18.52■□□□□ 0.56
LMNA-223ENST00000515459 TET1Q8NFU7 2136 aa18.52■□□□□ 0.56
LMNA-223ENST00000515459 KRT40Q6A162 431 aa18.52■□□□□ 0.56
LMNA-223ENST00000515459 EVI5LQ96CN4 794 aa18.52■□□□□ 0.56
LMNA-223ENST00000515459 ARHGEF15O94989 841 aa18.51■□□□□ 0.55
LMNA-223ENST00000515459 FGAP02671 866 aa18.51■□□□□ 0.55
LMNA-223ENST00000515459 KCNJ6P48051 423 aa18.51■□□□□ 0.55
LMNA-223ENST00000515459 CHMP4BP1P59074 171 aa18.51■□□□□ 0.55
LMNA-223ENST00000515459 ZNF543Q08ER8 600 aa18.51■□□□□ 0.55
LMNA-223ENST00000515459 PTGISQ16647 500 aa18.51■□□□□ 0.55
LMNA-223ENST00000515459 CCDC155Q8N6L0 562 aa18.51■□□□□ 0.55
LMNA-223ENST00000515459 TTC14Q96N46 770 aa18.51■□□□□ 0.55
LMNA-223ENST00000515459 PCDHB15Q9Y5E8 787 aa18.51■□□□□ 0.55
LMNA-223ENST00000515459 COL4A4P53420 1690 aaPredicted RBP18.5■□□□□ 0.55
LMNA-223ENST00000515459 SALL3Q9BXA9 1300 aa18.5■□□□□ 0.55
LMNA-223ENST00000515459 TLL1O43897 1013 aa18.5■□□□□ 0.55
LMNA-223ENST00000515459 CAGE1Q8TC20 777 aa18.5■□□□□ 0.55
LMNA-223ENST00000515459 AFAP1L1Q8TED9 768 aa18.5■□□□□ 0.55
LMNA-223ENST00000515459 HLA-CQ95604 372 aa18.5■□□□□ 0.55
LMNA-223ENST00000515459 ARIH2O95376 493 aa18.49■□□□□ 0.55
LMNA-223ENST00000515459 SNHG28P0DPA3 235 aa18.49■□□□□ 0.55
LMNA-223ENST00000515459 GRB10Q13322 594 aa18.49■□□□□ 0.55
LMNA-223ENST00000515459 RGS22Q8NE09 1264 aa18.49■□□□□ 0.55
LMNA-223ENST00000515459 ZBTB47Q9UFB7 747 aaPredicted RBP18.49■□□□□ 0.55
LMNA-223ENST00000515459 KIAA1217Q5T5P2 1943 aa18.49■□□□□ 0.55
LMNA-223ENST00000515459 ZMYM6O95789 1325 aa18.49■□□□□ 0.55
LMNA-223ENST00000515459 MMP3P08254 477 aa18.48■□□□□ 0.55
LMNA-223ENST00000515459 WDR5P61964 334 aaKnown RBP18.48■□□□□ 0.55
LMNA-223ENST00000515459 USH1GQ495M9 461 aa18.48■□□□□ 0.55
LMNA-223ENST00000515459 MCMDC2Q4G0Z9 681 aa18.48■□□□□ 0.55
LMNA-223ENST00000515459 GPATCH4Q5T3I0 446 aaKnown RBP18.48■□□□□ 0.55
LMNA-223ENST00000515459 CCDC62Q6P9F0 684 aa18.48■□□□□ 0.55
LMNA-223ENST00000515459 MFSD6Q6ZSS7 791 aa18.48■□□□□ 0.55
LMNA-223ENST00000515459 SESTD1Q86VW0 696 aa18.48■□□□□ 0.55
LMNA-223ENST00000515459 AFG1LQ8WV93 481 aa18.48■□□□□ 0.55
LMNA-223ENST00000515459 ZBED2Q9BTP6 218 aa18.48■□□□□ 0.55
LMNA-223ENST00000515459 MAF1Q9H063 256 aa18.48■□□□□ 0.55
LMNA-223ENST00000515459 LPXNO60711 386 aa18.47■□□□□ 0.55
LMNA-223ENST00000515459 PARNO95453 639 aaKnown RBP18.47■□□□□ 0.55
LMNA-223ENST00000515459 GH1P01241 217 aa18.47■□□□□ 0.55
LMNA-223ENST00000515459 HSPD1P10809 573 aaKnown RBP18.47■□□□□ 0.55
LMNA-223ENST00000515459 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
LMNA-223ENST00000515459 SELPP16109 830 aa18.47■□□□□ 0.55
LMNA-223ENST00000515459 GDF6Q6KF10 455 aaPredicted RBP18.47■□□□□ 0.55
LMNA-223ENST00000515459 SEPT14Q6ZU15 432 aa18.47■□□□□ 0.55
LMNA-223ENST00000515459 SPRED2Q7Z698 418 aa18.47■□□□□ 0.55
LMNA-223ENST00000515459 FAM227BQ96M60 508 aa18.47■□□□□ 0.55
LMNA-223ENST00000515459 CTAGE1Q96RT6 745 aa18.47■□□□□ 0.55
LMNA-223ENST00000515459 EPHX3Q9H6B9 360 aa18.47■□□□□ 0.55
LMNA-223ENST00000515459 A0A0D9SFI3 127 aa18.46■□□□□ 0.55
LMNA-223ENST00000515459 LCHNA4D1U4 455 aa18.46■□□□□ 0.55
LMNA-223ENST00000515459 CASTP20810 708 aaKnown RBP18.46■□□□□ 0.55
LMNA-223ENST00000515459 HAND2P61296 217 aa18.46■□□□□ 0.55
LMNA-223ENST00000515459 LY6KQ17RY6 165 aa18.46■□□□□ 0.55
LMNA-223ENST00000515459 CNKSR3Q6P9H4 555 aa18.46■□□□□ 0.55
LMNA-223ENST00000515459 LRRC8DQ7L1W4 858 aa18.46■□□□□ 0.55
LMNA-223ENST00000515459 LRFN3Q9BTN0 628 aa18.46■□□□□ 0.55
LMNA-223ENST00000515459 LMCD1Q9NZU5 365 aa18.46■□□□□ 0.55
LMNA-223ENST00000515459 GOLGA8HP0CJ92 632 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 ARHGAP1Q07960 439 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 GPNMBQ14956 572 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 STXBP2Q15833 593 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 ANKRD45Q5TZF3 282 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 CHST3Q7LGC8 479 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 TMCO2Q7Z6W1 182 aaPredicted RBP18.45■□□□□ 0.54
LMNA-223ENST00000515459 TICAM2Q86XR7 235 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 NSUN6Q8TEA1 469 aaKnown RBP18.45■□□□□ 0.54
LMNA-223ENST00000515459 KAT2BQ92831 832 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 TAAR1Q96RJ0 339 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 GTF2IRD1Q9UHL9 959 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 HCN4Q9Y3Q4 1203 aa18.45■□□□□ 0.54
LMNA-223ENST00000515459 ARIH1Q9Y4X5 557 aaPredicted RBP18.45■□□□□ 0.54
LMNA-223ENST00000515459 MYH6P13533 1939 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms