RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TAAR1Q96RJ0 339 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 PDGFCQ9NRA1 345 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 COL20A1Q9P218 1284 aa14.78□□□□□ -0.04
CLCN3-210ENST00000515420 NID2Q14112 1375 aa14.77□□□□□ -0.04
CLCN3-210ENST00000515420 GCOM1H8Y6P7 765 aaPredicted RBP14.77□□□□□ -0.05
CLCN3-210ENST00000515420 CTAGE5O15320 804 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 ZBTB43O43298 467 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 POLR2MP0CAP2 368 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 RXRAP19793 462 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 RPS6KB1P23443 525 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 RTP1P59025 263 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 FGD1P98174 961 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 STXBP2Q15833 593 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 KCNA10Q16322 511 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 GNASQ5JWF2 1037 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 ARHGEF16Q5VV41 709 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 NOL8Q76FK4 1167 aaKnown RBP14.77□□□□□ -0.05
CLCN3-210ENST00000515420 TCEANC2Q96MN5 208 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 WDR11Q9BZH6 1224 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 AP5M1Q9H0R1 490 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 PXMP2Q9NR77 195 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 BRPF3Q9ULD4 1205 aa14.77□□□□□ -0.05
CLCN3-210ENST00000515420 DDX49Q9Y6V7 483 aaKnown RBP14.77□□□□□ -0.05
CLCN3-210ENST00000515420 KLF18A0A0U1RQI7 1052 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 CCDC196A0A1B0GTZ2 297 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 MYADML2A6NDP7 307 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 ZEB2O60315 1214 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 CABYRO75952 493 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 ASGR1P07306 291 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 CASTP20810 708 aaKnown RBP14.76□□□□□ -0.05
CLCN3-210ENST00000515420 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
CLCN3-210ENST00000515420 TTLL4Q14679 1199 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 FSCN1Q16658 493 aaKnown RBP14.76□□□□□ -0.05
CLCN3-210ENST00000515420 RTN1Q16799 776 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 FERMT2Q96AC1 680 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 GLT1D1Q96MS3 346 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 SEZ6LQ9BYH1 1024 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 TM6SF1Q9BZW5 370 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 PRO3102Q9H379 93 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 STARD7Q9NQZ5 370 aa14.76□□□□□ -0.05
CLCN3-210ENST00000515420 FRMPD4Q14CM0 1322 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 MROH7Q68CQ1 1323 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 CNTNAP5Q8WYK1 1306 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 A0A1W2PPC1 479 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 GOLGA8AA7E2F4 631 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 GOLGA8BA8MQT2 603 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 hCG_1984214I3L0E3 225 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 PIK3CDO00329 1044 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 EIF3JO75822 258 aaKnown RBP14.75□□□□□ -0.05
CLCN3-210ENST00000515420 NR3C2P08235 984 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 EVCP57679 992 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 Q6ZUG5 572 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 RUFY3Q7L099 469 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 ZNF713Q8N859 430 aaPredicted RBP14.75□□□□□ -0.05
CLCN3-210ENST00000515420 TOX2Q96NM4 488 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 PDCD2LQ9BRP1 358 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 ZSWIM6Q9HCJ5 1215 aa14.75□□□□□ -0.05
CLCN3-210ENST00000515420 LTBP2Q14767 1821 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 A0A0U1RQG5 324 aaPredicted RBP14.74□□□□□ -0.05
CLCN3-210ENST00000515420 DYNC1LI2O43237 492 aaPredicted RBP14.74□□□□□ -0.05
CLCN3-210ENST00000515420 EIF2AK2P19525 551 aaKnown RBP14.74□□□□□ -0.05
CLCN3-210ENST00000515420 HOXA13P31271 388 aaPredicted RBP14.74□□□□□ -0.05
CLCN3-210ENST00000515420 BMP8BP34820 402 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 CPT1AP50416 773 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 FUT2Q10981 343 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 PGM5Q15124 567 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 TRIM60Q495X7 471 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 BRDTQ58F21 947 aaPredicted RBP14.74□□□□□ -0.05
CLCN3-210ENST00000515420 CCDC62Q6P9F0 684 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 KCNV1Q6PIU1 500 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 ANKRD33Q7Z3H0 272 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 RAB11FIP4Q86YS3 637 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 BRF1Q92994 677 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 CUL5Q93034 780 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 GDF15Q99988 308 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 PRKAG2Q9UGJ0 569 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 ZMYND8Q9ULU4 1186 aaPredicted RBP14.74□□□□□ -0.05
CLCN3-210ENST00000515420 ATP11BQ9Y2G3 1177 aa14.74□□□□□ -0.05
CLCN3-210ENST00000515420 STAM2O75886 525 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 TXNP10599 105 aaKnown RBP14.73□□□□□ -0.05
CLCN3-210ENST00000515420 CPA1P15085 419 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 METAP2P50579 478 aaKnown RBP eCLIP14.73□□□□□ -0.05
CLCN3-210ENST00000515420 ANAPC15P60006 121 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 HABP4Q5JVS0 413 aaKnown RBP14.73□□□□□ -0.05
CLCN3-210ENST00000515420 PPP1R18Q6NYC8 613 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 VSIG10LQ86VR7 867 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 CMTR1Q8N1G2 835 aaKnown RBP14.73□□□□□ -0.05
CLCN3-210ENST00000515420 PIBF1Q8WXW3 757 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 FAM217BQ9NTX9 383 aaPredicted RBP14.73□□□□□ -0.05
CLCN3-210ENST00000515420 POLR3EQ9NVU0 708 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
CLCN3-210ENST00000515420 COLQQ9Y215 455 aaPredicted RBP14.73□□□□□ -0.05
CLCN3-210ENST00000515420 CYP46A1Q9Y6A2 500 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 SCN10AQ9Y5Y9 1956 aa14.73□□□□□ -0.05
CLCN3-210ENST00000515420 RANBP2P49792 3224 aaKnown RBP14.72□□□□□ -0.05
CLCN3-210ENST00000515420 MEIS2O14770 477 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 KPNA6O60684 536 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 CDC27P30260 824 aa14.72□□□□□ -0.05
CLCN3-210ENST00000515420 CCND2P30279 289 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms