RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 NR3C2P08235 984 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 TXNP10599 105 aaKnown RBP13.31□□□□□ -0.28
VCAN-212ENST00000515397 CST5P28325 142 aaPredicted RBP13.31□□□□□ -0.28
VCAN-212ENST00000515397 KIF5BP33176 963 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 FXR1P51114 621 aaKnown RBP eCLIP13.31□□□□□ -0.28
VCAN-212ENST00000515397 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 SNX17Q15036 470 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 TSGA10IPQ3SY00 556 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 FANCBQ8NB91 859 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 PCSK9Q8NBP7 692 aaKnown RBP13.31□□□□□ -0.28
VCAN-212ENST00000515397 OR6J1Q8NGC5 347 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 IL31RAQ8NI17 732 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 NSUN6Q8TEA1 469 aaKnown RBP13.31□□□□□ -0.28
VCAN-212ENST00000515397 BADQ92934 168 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 RRP36Q96EU6 259 aaKnown RBP13.31□□□□□ -0.28
VCAN-212ENST00000515397 GLT1D1Q96MS3 346 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 UBE2OQ9C0C9 1292 aaKnown RBP13.31□□□□□ -0.28
VCAN-212ENST00000515397 PDLIM7Q9NR12 457 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 PXMP2Q9NR77 195 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 PRKAG2Q9UGJ0 569 aa13.31□□□□□ -0.28
VCAN-212ENST00000515397 RBM47A0AV96 593 aaKnown RBP13.3□□□□□ -0.28
VCAN-212ENST00000515397 GCOM1H8Y6P7 765 aaPredicted RBP13.3□□□□□ -0.28
VCAN-212ENST00000515397 RBAK-RBAKDNI3L0D1 243 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 SOX1O00570 391 aaPredicted RBP13.3□□□□□ -0.28
VCAN-212ENST00000515397 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 MYL3P08590 195 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 POLR2MP0CAP2 368 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 HSPA4P34932 840 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 HSD17B4P51659 736 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 APOBRQ0VD83 1088 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 APOA5Q6Q788 366 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 USP17L6PQ6QN14 398 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 SYNE3Q6ZMZ3 975 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 KCNB2Q92953 911 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 MAP3K14Q99558 947 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 LBHD1Q9BQE6 289 aaPredicted RBP13.3□□□□□ -0.28
VCAN-212ENST00000515397 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
VCAN-212ENST00000515397 MTA3Q9BTC8 594 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 TMEM39AQ9NV64 488 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 GRIN2DO15399 1336 aa13.3□□□□□ -0.28
VCAN-212ENST00000515397 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 CDK7P50613 346 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 FGD1P98174 961 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 FAAP100Q0VG06 881 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 PPP2R5BQ15173 497 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 STXBP2Q15833 593 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 Q6ZUG5 572 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 TMTC3Q6ZXV5 915 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 SGMS1Q86VZ5 419 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 GPKOWQ92917 476 aaPredicted RBP eCLIP13.29□□□□□ -0.28
VCAN-212ENST00000515397 LRCH3Q96II8 777 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 MPHOSPH6Q99547 160 aaKnown RBP13.29□□□□□ -0.28
VCAN-212ENST00000515397 SPZ1Q9BXG8 430 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 MYH6P13533 1939 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 SZT2Q5T011 3432 aa13.29□□□□□ -0.28
VCAN-212ENST00000515397 A0A0U1RQG5 324 aaPredicted RBP13.28□□□□□ -0.28
VCAN-212ENST00000515397 DCDC2CA8MYV0 355 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 B4DLN1 442 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 ARVCFO00192 962 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 ZBTB43O43298 467 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 RGS20O76081 388 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 REC8O95072 547 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 CLTBP09497 229 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 CALM1P0DP23 149 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 CALM2P0DP24 149 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 CALM3P0DP25 149 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 CDC27P30260 824 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 ADD1P35611 737 aaKnown RBP13.28□□□□□ -0.28
VCAN-212ENST00000515397 GNAQP50148 359 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 MRPL12P52815 198 aaKnown RBP13.28□□□□□ -0.28
VCAN-212ENST00000515397 KRT32Q14532 448 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 TTLL4Q14679 1199 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 C1orf53Q5VUE5 145 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 CCDC62Q6P9F0 684 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 SCFD2Q8WU76 684 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 BRF1Q92994 677 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 IWS1Q96ST2 819 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 LZTS2Q9BRK4 669 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 PDCD2LQ9BRP1 358 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 USP26Q9BXU7 913 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 TRPV6Q9H1D0 765 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 BCAS3Q9H6U6 928 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
VCAN-212ENST00000515397 RTEL1Q9NZ71 1219 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
VCAN-212ENST00000515397 Q9Y3F1 56 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
VCAN-212ENST00000515397 ELP1O95163 1332 aa13.28□□□□□ -0.28
VCAN-212ENST00000515397 LAMA3Q16787 3333 aa13.27□□□□□ -0.28
VCAN-212ENST00000515397 LOC102724159A0A0B4J2E5 919 aa13.27□□□□□ -0.29
VCAN-212ENST00000515397 GOLGA8AA7E2F4 631 aa13.27□□□□□ -0.29
VCAN-212ENST00000515397 GOLGA8BA8MQT2 603 aa13.27□□□□□ -0.29
VCAN-212ENST00000515397 ZEB2O60315 1214 aa13.27□□□□□ -0.29
VCAN-212ENST00000515397 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.29
VCAN-212ENST00000515397 RAG1P15918 1043 aa13.27□□□□□ -0.29
VCAN-212ENST00000515397 CASTP20810 708 aaKnown RBP13.27□□□□□ -0.29
VCAN-212ENST00000515397 RPS6KB1P23443 525 aa13.27□□□□□ -0.29
VCAN-212ENST00000515397 BMP8BP34820 402 aa13.27□□□□□ -0.29
VCAN-212ENST00000515397 EPHB4P54760 987 aa13.27□□□□□ -0.29
VCAN-212ENST00000515397 NKX3-2P78367 333 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms