RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EHMT1Q9H9B1 1298 aa13.7□□□□□ -0.22
PDLIM5-220ENST00000514830 VPS37CA5D8V6 355 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 SPDYE3A6NKU9 549 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 ADAMTS3O15072 1205 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 FKTNO75072 461 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 CYP3A4P08684 503 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 SREBF1P36956 1147 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 TRAPPC10P48553 1259 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 RESTQ13127 1097 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 NR5A1Q13285 461 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 ARHGEF6Q15052 776 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 UBE2SQ16763 222 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 ZNF792Q3KQV3 632 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 XRRA1Q6P2D8 792 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 MSL3Q8N5Y2 521 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 MORC4Q8TE76 937 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 TRIM47Q96LD4 638 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 IWS1Q96ST2 819 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 ANO3Q9BYT9 981 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 CHMP5Q9NZZ3 219 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 COL20A1Q9P218 1284 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 BIN2Q9UBW5 565 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 ADD3Q9UEY8 706 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 GJD2Q9UKL4 321 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 ZDHHC9Q9Y397 364 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 MCM3APO60318 1980 aa13.69□□□□□ -0.22
PDLIM5-220ENST00000514830 CCDC194A0A1B0GVG4 234 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 KIF28PB7ZC32 967 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 TNPO2O14787 897 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 F13A1P00488 732 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 IGHA2P01877 340 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 XRCC5P13010 732 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 ADORA2AP29274 412 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 CTGFP29279 349 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 PSMC4P43686 418 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 USP11P51784 963 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 FOSBP53539 338 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 SOX10P56693 466 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 MAP2K5Q13163 448 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 PKP1Q13835 747 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 NONOQ15233 471 aaKnown RBP eCLIP13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 PRPF38BQ5VTL8 546 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 MOXD1Q6UVY6 613 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 NSUN6Q8TEA1 469 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 NUDT12Q9BQG2 462 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 PXMP2Q9NR77 195 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 SLC5A4Q9NY91 659 aa13.68□□□□□ -0.22
PDLIM5-220ENST00000514830 TCHHQ07283 1943 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 B4DLN1 442 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 STAM2O75886 525 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 EDNRBP24530 442 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 CIITAP33076 1130 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 PRMT2P55345 433 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 ORC2Q13416 577 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 IRF5Q13568 498 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 WDR78Q5VTH9 848 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 JAKMIP3Q5VZ66 844 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 MAMDC4Q6UXC1 1216 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 ZNF296Q8WUU4 475 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 FGD4Q96M96 766 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 TAAR1Q96RJ0 339 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 MPHOSPH6Q99547 160 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 NAP1L4Q99733 375 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 PDCD2LQ9BRP1 358 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
PDLIM5-220ENST00000514830 ASTN1O14525 1302 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 COBLO75128 1261 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 CYP3A7P24462 503 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 HOXD10P28358 340 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 RGS2P41220 211 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 ALDH5A1P51649 535 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 GNL2Q13823 731 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 PGM5Q15124 567 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 RILPL1Q5EBL4 403 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 EARS2Q5JPH6 523 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 PCNX4Q63HM2 1172 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 ATL3Q6DD88 541 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 PIK3AP1Q6ZUJ8 805 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 FCHSD1Q86WN1 690 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 TRMT44Q8IYL2 757 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 RASGRP4Q8TDF6 673 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 MBOAT7Q96N66 472 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 APBA2Q99767 749 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
PDLIM5-220ENST00000514830 ASB14A6NK59 587 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 EDIL3O43854 480 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 GCFC2P16383 781 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 ARHGAP4P98171 946 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 CAP1Q01518 475 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 CNTN2Q02246 1040 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 ARHGEF16Q5VV41 709 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 MYSM1Q5VVJ2 828 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 OLFML2BQ68BL8 750 aa13.65□□□□□ -0.22
PDLIM5-220ENST00000514830 PPP4R3AQ6IN85 833 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms