RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 CCNA1P78396 465 aa19.03■□□□□ 0.64
SNCAIP-220ENST00000514497 GNL2Q13823 731 aaKnown RBP19.03■□□□□ 0.64
SNCAIP-220ENST00000514497 TYW1BQ6NUM6 668 aa19.03■□□□□ 0.64
SNCAIP-220ENST00000514497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNCAIP-220ENST00000514497 CPXCR1Q8N123 301 aa19.03■□□□□ 0.64
SNCAIP-220ENST00000514497 RAVER2Q9HCJ3 691 aaKnown RBP19.03■□□□□ 0.64
SNCAIP-220ENST00000514497 MORF4L1Q9UBU8 362 aa19.03■□□□□ 0.64
SNCAIP-220ENST00000514497 KCNJ14Q9UNX9 436 aa19.03■□□□□ 0.64
SNCAIP-220ENST00000514497 DOCK3Q8IZD9 2030 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 F13A1P00488 732 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 FOSP01100 380 aaPredicted RBP19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 CYP2C8P10632 490 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 SNAP25P60880 206 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 USH1GQ495M9 461 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 ATL3Q6DD88 541 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 FAM109BQ6ICB4 259 aaPredicted RBP19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 SNRNP48Q6IEG0 339 aaKnown RBP19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 DIS3L2Q8IYB7 885 aaKnown RBP19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 ANKLE1Q8NAG6 615 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 SHCBP1Q8NEM2 672 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 AGBL1Q96MI9 1066 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 SPATC1LQ9H0A9 340 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 RBPJLQ9UBG7 517 aa19.02■□□□□ 0.64
SNCAIP-220ENST00000514497 MYH15Q9Y2K3 1946 aa19.02■□□□□ 0.63
SNCAIP-220ENST00000514497 POTEB2H3BUK9 544 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 GUCY1B3Q02153 619 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 AP3B2Q13367 1082 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 IRF5Q13568 498 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 NPY5RQ15761 445 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 MCTP1Q6DN14 999 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 NOSTRINQ8IVI9 506 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 REXO1Q8N1G1 1221 aaKnown RBP19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 GPRC5AQ8NFJ5 357 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 TRERF1Q96PN7 1200 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 MROH8Q9H579 483 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 GJB4Q9NTQ9 266 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 BTBD7Q9P203 1132 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 ZDHHC9Q9Y397 364 aa19.01■□□□□ 0.63
SNCAIP-220ENST00000514497 TTC28Q96AY4 2481 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 BTBD18B2RXH4 712 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 M0R2N6 131 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 TNPO2O14787 897 aaKnown RBP19■□□□□ 0.63
SNCAIP-220ENST00000514497 ALAS1P13196 640 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 ERVK-9P63128 1117 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 ERVK-24P63145 666 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 PKP1Q13835 747 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 FAM110CQ1W6H9 321 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 KRT25Q7Z3Z0 450 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 ACAD9Q9H845 621 aa19■□□□□ 0.63
SNCAIP-220ENST00000514497 PRUNE2Q8WUY3 3088 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 LAMA2P24043 3122 aaKnown RBP18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 GCOM1H8Y6P7 765 aaPredicted RBP18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 CNMDO75829 334 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 POLR2MP0CAP2 368 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 CLK2P49760 499 aaKnown RBP18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 HSD17B4P51659 736 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 FOSBP53539 338 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 RESTQ13127 1097 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 PLS1Q14651 629 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 POTEEQ6S8J3 1075 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 CLEC4DQ8WXI8 215 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 TNFRSF25Q93038 417 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 PAGR1Q9BTK6 254 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 C11orf49Q9H6J7 331 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 RNF146Q9NTX7 359 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 PFASO15067 1338 aa18.99■□□□□ 0.63
SNCAIP-220ENST00000514497 MEIS2O14770 477 aa18.98■□□□□ 0.63
SNCAIP-220ENST00000514497 OPLAHO14841 1288 aa18.98■□□□□ 0.63
SNCAIP-220ENST00000514497 TRAPPC10P48553 1259 aa18.98■□□□□ 0.63
SNCAIP-220ENST00000514497 MOV10L1Q9BXT6 1211 aaKnown RBP18.98■□□□□ 0.63
SNCAIP-220ENST00000514497 EHMT1Q9H9B1 1298 aa18.98■□□□□ 0.63
SNCAIP-220ENST00000514497 PCDHA6Q9UN73 950 aa18.98■□□□□ 0.63
SNCAIP-220ENST00000514497 PCDHA8Q9Y5H6 950 aa18.98■□□□□ 0.63
SNCAIP-220ENST00000514497 CCDC194A0A1B0GVG4 234 aa18.97■□□□□ 0.63
SNCAIP-220ENST00000514497 STRNO43815 780 aa18.97■□□□□ 0.63
SNCAIP-220ENST00000514497 RILPL1Q5EBL4 403 aa18.97■□□□□ 0.63
SNCAIP-220ENST00000514497 CLEC17AQ6ZS10 378 aa18.97■□□□□ 0.63
SNCAIP-220ENST00000514497 MAFAQ8NHW3 353 aaPredicted RBP18.97■□□□□ 0.63
SNCAIP-220ENST00000514497 SYMPKQ92797 1274 aaKnown RBP18.97■□□□□ 0.63
SNCAIP-220ENST00000514497 TXNRD2Q9NNW7 524 aa18.97■□□□□ 0.63
SNCAIP-220ENST00000514497 RIPK3Q9Y572 518 aa18.97■□□□□ 0.63
SNCAIP-220ENST00000514497 ZNFX1Q9P2E3 1918 aaKnown RBP18.97■□□□□ 0.63
SNCAIP-220ENST00000514497 SPDYE3A6NKU9 549 aa18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 CFBP00751 764 aa18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 NONOQ15233 471 aaKnown RBP eCLIP18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 ZNF697Q5TEC3 545 aa18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 RNF207Q6ZRF8 634 aa18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 OXER1Q8TDS5 423 aa18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 ZNF396Q96N95 335 aaPredicted RBP18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 NAP1L4Q99733 375 aaKnown RBP18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 NOL7Q9UMY1 257 aaKnown RBP18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 TCHHQ07283 1943 aa18.96■□□□□ 0.63
SNCAIP-220ENST00000514497 MUC3AQ02505 3323 aa18.95■□□□□ 0.62
SNCAIP-220ENST00000514497 MAPK4P31152 587 aa18.95■□□□□ 0.62
SNCAIP-220ENST00000514497 NR5A1Q13285 461 aa18.95■□□□□ 0.62
SNCAIP-220ENST00000514497 ORC2Q13416 577 aaPredicted RBP18.95■□□□□ 0.62
SNCAIP-220ENST00000514497 Q3C1V9 767 aa18.95■□□□□ 0.62
SNCAIP-220ENST00000514497 MUM1L1Q5H9M0 696 aa18.95■□□□□ 0.62
SNCAIP-220ENST00000514497 FERMT3Q86UX7 667 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms