RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 FAM184BQ9ULE4 1060 aa9.58□□□□□ -0.88
CCL28-204ENST00000514421 A0A0G2JMZ2 1700 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 hCG_1642624A0A1W2PR95 340 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 OPLAHO14841 1288 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 PRPF3O43395 683 aaKnown RBP9.57□□□□□ -0.88
CCL28-204ENST00000514421 AKR1A1P14550 325 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 ALDH5A1P51649 535 aaPredicted RBP9.57□□□□□ -0.88
CCL28-204ENST00000514421 HSD17B4P51659 736 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 CCT2P78371 535 aaKnown RBP9.57□□□□□ -0.88
CCL28-204ENST00000514421 IQSEC1Q6DN90 963 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 SLC30A10Q6XR72 485 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 ARRDC4Q8NCT1 418 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 IWS1Q96ST2 819 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 RMDN3Q96TC7 470 aa9.57□□□□□ -0.88
CCL28-204ENST00000514421 LARP6Q9BRS8 491 aaKnown RBP9.57□□□□□ -0.88
CCL28-204ENST00000514421 ZHX1Q9UKY1 873 aaPredicted RBP9.57□□□□□ -0.88
CCL28-204ENST00000514421 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.57□□□□□ -0.88
CCL28-204ENST00000514421 ZNFX1Q9P2E3 1918 aaKnown RBP9.56□□□□□ -0.88
CCL28-204ENST00000514421 SMCHD1A6NHR9 2005 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 BAG4O95429 457 aaKnown RBP9.56□□□□□ -0.88
CCL28-204ENST00000514421 RARBP10826 455 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 IFNAR1P17181 557 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 AKAP17AQ02040 695 aaKnown RBP9.56□□□□□ -0.88
CCL28-204ENST00000514421 MLLT1Q03111 559 aaPredicted RBP9.56□□□□□ -0.88
CCL28-204ENST00000514421 PDE4DQ08499 809 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 NTRK3Q16288 839 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 SKOR2Q2VWA4 1001 aaPredicted RBP9.56□□□□□ -0.88
CCL28-204ENST00000514421 CCDC144BQ3MJ40 725 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 ARHGEF16Q5VV41 709 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 CPLX2Q6PUV4 134 aaKnown RBP9.56□□□□□ -0.88
CCL28-204ENST00000514421 CUL5Q93034 780 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 SHISA4Q96DD7 197 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 KATNBL1Q9H079 304 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 PSTPIP2Q9H939 334 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 VTA1Q9NP79 307 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 COL20A1Q9P218 1284 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
CCL28-204ENST00000514421 COL11A1P12107 1806 aaPredicted RBP9.56□□□□□ -0.88
CCL28-204ENST00000514421 PARP14Q460N5 1801 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 ASTN1O14525 1302 aa9.56□□□□□ -0.88
CCL28-204ENST00000514421 CENPFP49454 3210 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 PLXNB2O15031 1838 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 hCG_1984214I3L0E3 225 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 PIK3CDO00329 1044 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 CPLX1O14810 134 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 PFKFB2O60825 505 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 DUSP11O75319 330 aaKnown RBP9.55□□□□□ -0.88
CCL28-204ENST00000514421 EIF3JO75822 258 aaKnown RBP9.55□□□□□ -0.88
CCL28-204ENST00000514421 FARP2O94887 1054 aaPredicted RBP9.55□□□□□ -0.88
CCL28-204ENST00000514421 NR3C2P08235 984 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 EDNRBP24530 442 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 HOXA13P31271 388 aaPredicted RBP9.55□□□□□ -0.88
CCL28-204ENST00000514421 TNFAIP2Q03169 654 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 ST3GAL1Q11201 340 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 STK3Q13188 491 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 PKP1Q13835 747 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 GSE1Q14687 1217 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 STXBP2Q15833 593 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 ME3Q16798 604 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 PFKFB3Q16875 520 aaPredicted RBP9.55□□□□□ -0.88
CCL28-204ENST00000514421 TAPT1Q6NXT6 567 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 EEPD1Q7L9B9 569 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 HEATR3Q7Z4Q2 680 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 NECAB2Q7Z6G3 386 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 UBE2Q1Q7Z7E8 422 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 FCHSD1Q86WN1 690 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 TEX2Q8IWB9 1127 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 ZNF713Q8N859 430 aaPredicted RBP9.55□□□□□ -0.88
CCL28-204ENST00000514421 SMARCC2Q8TAQ2 1214 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 PAWRQ96IZ0 340 aaKnown RBP9.55□□□□□ -0.88
CCL28-204ENST00000514421 GLT8D2Q9H1C3 349 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 FOXD4L1Q9NU39 408 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 TPCN1Q9ULQ1 816 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 CNTNAP5Q8WYK1 1306 aa9.55□□□□□ -0.88
CCL28-204ENST00000514421 NID2Q14112 1375 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 RBM47A0AV96 593 aaKnown RBP9.54□□□□□ -0.88
CCL28-204ENST00000514421 SMCO2A6NFE2 343 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 MEIS2O14770 477 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 LARGE1O95461 756 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 SCG2P13521 617 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 MNX1P50219 401 aaPredicted RBP9.54□□□□□ -0.88
CCL28-204ENST00000514421 SSRP1Q08945 709 aaKnown RBP9.54□□□□□ -0.88
CCL28-204ENST00000514421 ANO1Q5XXA6 986 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 WWC2Q6AWC2 1192 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 USP17L6PQ6QN14 398 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 NOL8Q76FK4 1167 aaKnown RBP9.54□□□□□ -0.88
CCL28-204ENST00000514421 RNF180Q86T96 592 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 VSIG10LQ86VR7 867 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 TRIM22Q8IYM9 498 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 GPKOWQ92917 476 aaPredicted RBP eCLIP9.54□□□□□ -0.88
CCL28-204ENST00000514421 PHKBQ93100 1093 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 PDCD2LQ9BRP1 358 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 SLC26A6Q9BXS9 759 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 RNF26Q9BY78 433 aaPredicted RBP9.54□□□□□ -0.88
CCL28-204ENST00000514421 SPC25Q9HBM1 224 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 NCOA5Q9HCD5 579 aaKnown RBP9.54□□□□□ -0.88
CCL28-204ENST00000514421 XPNPEP3Q9NQH7 507 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 PXMP2Q9NR77 195 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 PDGFCQ9NRA1 345 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 BARHL2Q9NY43 387 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms