RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 ARHGEF16Q5VV41 709 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 KCNV1Q6PIU1 500 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 CATIPQ7Z7H3 387 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 FAM126BQ8IXS8 530 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 RPUSD2Q8IZ73 545 aaKnown RBP8.49□□□□□ -1.05
HTT-212ENST00000513639 RNPC3Q96LT9 517 aaKnown RBP8.49□□□□□ -1.05
HTT-212ENST00000513639 RMDN3Q96TC7 470 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 MTG1Q9BT17 334 aaPredicted RBP8.49□□□□□ -1.05
HTT-212ENST00000513639 MTA3Q9BTC8 594 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 MTIF3Q9H2K0 278 aaKnown RBP8.49□□□□□ -1.05
HTT-212ENST00000513639 PCDHA1Q9Y5I3 950 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 E7EWF7 191 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 ZBTB5O15062 677 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 CFBP00751 764 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 IRX5P78411 483 aaPredicted RBP8.48□□□□□ -1.05
HTT-212ENST00000513639 PLCB2Q00722 1185 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 PTH1RQ03431 593 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 PTPN11Q06124 597 aaPredicted RBP8.48□□□□□ -1.05
HTT-212ENST00000513639 CASC1Q6TDU7 716 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 SLC30A10Q6XR72 485 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 Q7L0L9 218 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 OR6J1Q8NGC5 347 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 SYTL5Q8TDW5 730 aaPredicted RBP8.48□□□□□ -1.05
HTT-212ENST00000513639 TAAR1Q96RJ0 339 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 MAP3K14Q99558 947 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 LZTS2Q9BRK4 669 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 CPVLQ9H3G5 476 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 SEMA6BQ9H3T3 888 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 HIPK3Q9H422 1215 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 MAD2L2Q9UI95 211 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 ALPK3Q96L96 1907 aa8.48□□□□□ -1.05
HTT-212ENST00000513639 PLXNA1Q9UIW2 1896 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 TMEM265A0A087WTH1 108 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 PNMA6FA0A0J9YX94 578 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 GCOM1H8Y6P7 765 aaPredicted RBP8.47□□□□□ -1.05
HTT-212ENST00000513639 FGBP02675 491 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 NR3C2P08235 984 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 MYL3P08590 195 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 POLR2MP0CAP2 368 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 TGFB3P10600 412 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 CSF2RAP15509 400 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 CASTP20810 708 aaKnown RBP8.47□□□□□ -1.05
HTT-212ENST00000513639 SMARCA1P28370 1054 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 KIF5BP33176 963 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 MCM5P33992 734 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 GNAQP50148 359 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 PURAQ00577 322 aaKnown RBP8.47□□□□□ -1.05
HTT-212ENST00000513639 TROAPQ12815 778 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 LAMC2Q13753 1193 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 GRM4Q14833 912 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 TMEM67Q5HYA8 995 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 NFRKBQ6P4R8 1299 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 PSRC1Q6PGN9 363 aaPredicted RBP8.47□□□□□ -1.05
HTT-212ENST00000513639 SEPT14Q6ZU15 432 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 STOX1Q6ZVD7 989 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 CYB5R4Q7L1T6 521 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 STAG2Q8N3U4 1231 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 IGDCC4Q8TDY8 1250 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 TBC1D5Q92609 795 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 MTMR8Q96EF0 704 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 TRPV6Q9H1D0 765 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 IL25Q9H293 177 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 ALDH8A1Q9H2A2 487 aaPredicted RBP8.47□□□□□ -1.05
HTT-212ENST00000513639 RIOX1Q9H6W3 641 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 IL23AQ9NPF7 189 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 DDX49Q9Y6V7 483 aaKnown RBP8.47□□□□□ -1.05
HTT-212ENST00000513639 GRIN2DO15399 1336 aa8.47□□□□□ -1.05
HTT-212ENST00000513639 PPFIA4O75335 1185 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 GH1P01241 217 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 CALM1P0DP23 149 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 CALM2P0DP24 149 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 CALM3P0DP25 149 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 CYP2C18P33260 490 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 HSD17B4P51659 736 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 EPHB4P54760 987 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 PSMC6P62333 389 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 GHRHRQ02643 423 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 DGKDQ16760 1214 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 NBPF20Q3BBV1 942 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 TMEM240Q5SV17 173 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 TMEM63BQ5T3F8 832 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 RNF20Q5VTR2 975 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 CCDC62Q6P9F0 684 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 ZNF365Q70YC5 407 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 C16orf59Q7L2K0 433 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 CENPQQ7L2Z9 268 aaPredicted RBP8.46□□□□□ -1.06
HTT-212ENST00000513639 VSIG10LQ86VR7 867 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 RETREG2Q8NC44 543 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 CTCFLQ8NI51 663 aaPredicted RBP8.46□□□□□ -1.06
HTT-212ENST00000513639 TMEM87BQ96K49 555 aa8.46□□□□□ -1.06
HTT-212ENST00000513639 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.46□□□□□ -1.06
HTT-212ENST00000513639 DDX41Q9UJV9 622 aaKnown RBP8.46□□□□□ -1.06
HTT-212ENST00000513639 RBM8AQ9Y5S9 174 aaKnown RBP8.46□□□□□ -1.06
HTT-212ENST00000513639 B4GALT4O60513 344 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 STAM2O75886 525 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 PFKMP08237 780 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 EIF2AK2P19525 551 aaKnown RBP8.45□□□□□ -1.06
HTT-212ENST00000513639 RFC2P35250 354 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 LIFRP42702 1097 aa8.45□□□□□ -1.06
HTT-212ENST00000513639 BFSP2Q13515 415 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms