RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
SPCS3-204ENST00000513139 TRIOO75962 3097 aa16.48■□□□□ 0.23
SPCS3-204ENST00000513139 FAM86C2PA6NEL3 165 aa16.48■□□□□ 0.23
SPCS3-204ENST00000513139 A6NJR5 290 aa16.48■□□□□ 0.23
SPCS3-204ENST00000513139 KCTD1Q719H9 257 aa16.48■□□□□ 0.23
SPCS3-204ENST00000513139 OR6J1Q8NGC5 347 aa16.48■□□□□ 0.23
SPCS3-204ENST00000513139 PURBQ96QR8 312 aaKnown RBP16.48■□□□□ 0.23
SPCS3-204ENST00000513139 NACAP1Q9BZK3 213 aa16.48■□□□□ 0.23
SPCS3-204ENST00000513139 CHMP4BQ9H444 224 aaKnown RBP16.48■□□□□ 0.23
SPCS3-204ENST00000513139 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
SPCS3-204ENST00000513139 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.47■□□□□ 0.23
SPCS3-204ENST00000513139 PARNO95453 639 aaKnown RBP16.47■□□□□ 0.23
SPCS3-204ENST00000513139 BAATQ14032 418 aaPredicted RBP16.47■□□□□ 0.23
SPCS3-204ENST00000513139 FAM178BQ8IXR5 827 aa16.47■□□□□ 0.23
SPCS3-204ENST00000513139 CCDC155Q8N6L0 562 aa16.47■□□□□ 0.23
SPCS3-204ENST00000513139 CAGE1Q8TC20 777 aa16.47■□□□□ 0.23
SPCS3-204ENST00000513139 AFAP1L1Q8TED9 768 aa16.47■□□□□ 0.23
SPCS3-204ENST00000513139 SNAP25P60880 206 aa16.46■□□□□ 0.23
SPCS3-204ENST00000513139 WDR5P61964 334 aaKnown RBP16.46■□□□□ 0.23
SPCS3-204ENST00000513139 PPP2R5BQ15173 497 aa16.46■□□□□ 0.23
SPCS3-204ENST00000513139 LEXMQ3ZCV2 418 aa16.46■□□□□ 0.23
SPCS3-204ENST00000513139 ALYREFQ86V81 257 aaKnown RBP16.46■□□□□ 0.23
SPCS3-204ENST00000513139 SCFD2Q8WU76 684 aa16.46■□□□□ 0.23
SPCS3-204ENST00000513139 MPHOSPH6Q99547 160 aaKnown RBP16.46■□□□□ 0.23
SPCS3-204ENST00000513139 RANBP17Q9H2T7 1088 aaKnown RBP16.46■□□□□ 0.23
SPCS3-204ENST00000513139 UBE2ZQ9H832 354 aaPredicted RBP16.46■□□□□ 0.23
SPCS3-204ENST00000513139 STX8Q9UNK0 236 aa16.46■□□□□ 0.23
SPCS3-204ENST00000513139 NOD1Q9Y239 953 aa16.46■□□□□ 0.23
SPCS3-204ENST00000513139 MICAL3Q7RTP6 2002 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 LCHNA4D1U4 455 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 M0R2C6 588 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 ERVK-21P61565 698 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 PPARAQ07869 468 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 BTNL9Q6UXG8 535 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 SPRED2Q7Z698 418 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 GJD3Q8N144 294 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 GDPD5Q8WTR4 605 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 TGS1Q96RS0 853 aaKnown RBP16.45■□□□□ 0.22
SPCS3-204ENST00000513139 RAD9AQ99638 391 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 ZBED2Q9BTP6 218 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 SUGCTQ9HAC7 445 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 RCAN3Q9UKA8 241 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 PNMA2Q9UL42 364 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 MYH7BA7E2Y1 1941 aa16.45■□□□□ 0.22
SPCS3-204ENST00000513139 ZNF318Q5VUA4 2279 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 NFIBO00712 420 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 GJB5O95377 273 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 ALADP13716 330 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 EDNRBP24530 442 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 NOVP48745 357 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 PDE4DQ08499 809 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 RBL2Q08999 1139 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 PTGISQ16647 500 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 CNKSR3Q6P9H4 555 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 DNERQ8NFT8 737 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 DCAF4Q8WV16 495 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 GPATCH3Q96I76 525 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 NAPBQ9H115 298 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 IL17RBQ9NRM6 502 aa16.44■□□□□ 0.22
SPCS3-204ENST00000513139 ABHD14A-ACY1A0A1B0GW23 586 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 TSPY2A6NKD2 308 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 B4DLN1 442 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 EFCAB14O75071 495 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 CXCL10P02778 98 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 SELPP16109 830 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 MRPL12P52815 198 aaKnown RBP16.43■□□□□ 0.22
SPCS3-204ENST00000513139 GPNMBQ14956 572 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 CHMP4CQ96CF2 233 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 KCNH6Q9H252 994 aa16.43■□□□□ 0.22
SPCS3-204ENST00000513139 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.43■□□□□ 0.22
SPCS3-204ENST00000513139 C5orf42Q9H799 3197 aa16.42■□□□□ 0.22
SPCS3-204ENST00000513139 SMARCA5O60264 1052 aaPredicted RBP16.42■□□□□ 0.22
SPCS3-204ENST00000513139 TXNP10599 105 aaKnown RBP16.42■□□□□ 0.22
SPCS3-204ENST00000513139 DEFB103AP81534 67 aa16.42■□□□□ 0.22
SPCS3-204ENST00000513139 PUS10Q3MIT2 529 aaKnown RBP16.42■□□□□ 0.22
SPCS3-204ENST00000513139 RNF207Q6ZRF8 634 aa16.42■□□□□ 0.22
SPCS3-204ENST00000513139 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.42■□□□□ 0.22
SPCS3-204ENST00000513139 CTAGE1Q96RT6 745 aa16.42■□□□□ 0.22
SPCS3-204ENST00000513139 NLRC5Q86WI3 1866 aa16.42■□□□□ 0.22
SPCS3-204ENST00000513139 MYH6P13533 1939 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 LINC01553A4QN01 128 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 NMT2O60551 498 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 KCNA5P22460 613 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 CALML3P27482 149 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 CCDC96Q2M329 555 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 SYDE2Q5VT97 1194 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 SLC30A10Q6XR72 485 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 LRRC8DQ7L1W4 858 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 RASGRP2Q7LDG7 609 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 PPP1R13LQ8WUF5 828 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 CLEC4DQ8WXI8 215 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 COPS5Q92905 334 aa16.41■□□□□ 0.22
SPCS3-204ENST00000513139 GRXCR2A6NFK2 248 aa16.4■□□□□ 0.22
SPCS3-204ENST00000513139 SSTR3P32745 418 aaPredicted RBP16.4■□□□□ 0.22
SPCS3-204ENST00000513139 MRE11P49959 708 aa16.4■□□□□ 0.22
SPCS3-204ENST00000513139 RPS6P62753 249 aaKnown RBP16.4■□□□□ 0.22
SPCS3-204ENST00000513139 IKBKEQ14164 716 aa16.4■□□□□ 0.22
SPCS3-204ENST00000513139 CSPP1Q1MSJ5 1256 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms