RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 COX20Q5RI15 118 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 MFSD14CQ5VZR4 134 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 CTR9Q6PD62 1173 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 SIAH1Q8IUQ4 282 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 C7orf61Q8IZ16 206 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 KBTBD3Q8NAB2 608 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 STRBPQ96SI9 672 aaKnown RBP11.28□□□□□ -0.6
TRIO-220ENST00000512979 MOV10L1Q9BXT6 1211 aaKnown RBP11.28□□□□□ -0.6
TRIO-220ENST00000512979 SPATC1LQ9H0A9 340 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 VCPKMTQ9H867 229 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 FLRT1Q9NZU1 646 aa11.28□□□□□ -0.6
TRIO-220ENST00000512979 ARPP21Q9UBL0 812 aaPredicted RBP11.28□□□□□ -0.6
TRIO-220ENST00000512979 WDR46O15213 610 aaKnown RBP11.27□□□□□ -0.61
TRIO-220ENST00000512979 HOXC6P09630 235 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 EEF2P13639 858 aaKnown RBP11.27□□□□□ -0.61
TRIO-220ENST00000512979 EIF1AXP47813 144 aaKnown RBP11.27□□□□□ -0.61
TRIO-220ENST00000512979 NR5A1Q13285 461 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 PLS1Q14651 629 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 MB21D1Q8N884 522 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 NPLOC4Q8TAT6 608 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 APPBP2Q92624 585 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 OSBP2Q969R2 916 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 ATG4CQ96DT6 458 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 PRO3102Q9H379 93 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 KANSL2Q9H9L4 492 aa11.27□□□□□ -0.61
TRIO-220ENST00000512979 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.61
TRIO-220ENST00000512979 ZMYND8Q9ULU4 1186 aaPredicted RBP11.27□□□□□ -0.61
TRIO-220ENST00000512979 BAZ2AQ9UIF9 1905 aaKnown RBP11.27□□□□□ -0.61
TRIO-220ENST00000512979 RNF113AO15541 343 aaKnown RBP11.26□□□□□ -0.61
TRIO-220ENST00000512979 RECKO95980 971 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 NR3C2P08235 984 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 ADORA2AP29274 412 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 AAMPQ13685 434 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 STK11IPQ8N1F8 1099 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 SHCBP1Q8NEM2 672 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 STIM2Q9P246 746 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 STAP2Q9UGK3 403 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 PFASO15067 1338 aa11.26□□□□□ -0.61
TRIO-220ENST00000512979 MYH7P12883 1935 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 GSG1L2A8MUP6 293 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 MINDY4BA8MYZ0 360 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 M0R2C6 588 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 TNFRSF10BO14763 440 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 GPAA1O43292 621 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 STRNO43815 780 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 ZFYP08048 801 aaPredicted RBP11.25□□□□□ -0.61
TRIO-220ENST00000512979 CNGA1P29973 690 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 CYP2C19P33261 490 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 PSMA6P60900 246 aaKnown RBP11.25□□□□□ -0.61
TRIO-220ENST00000512979 SBK1Q52WX2 424 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 GIMAP6Q6P9H5 292 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 NCAPG2Q86XI2 1143 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 MKNK2Q9HBH9 465 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 DDX20Q9UHI6 824 aaKnown RBP11.25□□□□□ -0.61
TRIO-220ENST00000512979 USP3Q9Y6I4 520 aa11.25□□□□□ -0.61
TRIO-220ENST00000512979 ERC2O15083 957 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 TREHO43280 583 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 FZD6O60353 706 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 COBLO75128 1261 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 IL2RAP01589 272 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 APPP05067 770 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 COL6A1P12109 1028 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 SYN1P17600 705 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 GNAT2P19087 354 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 TDO2P48775 406 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 TMEM132BQ14DG7 1078 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 TSNAXIP1Q2TAA8 658 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
TRIO-220ENST00000512979 FAM83BQ5T0W9 1011 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 OLFML2BQ68BL8 750 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 ALKBH2Q6NS38 261 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 TRPV1Q8NER1 839 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 OTUD7AQ8TE49 926 aaPredicted RBP11.24□□□□□ -0.61
TRIO-220ENST00000512979 MROH8Q9H579 483 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 EPB41L4AQ9HCS5 686 aaPredicted RBP11.24□□□□□ -0.61
TRIO-220ENST00000512979 FBXO28Q9NVF7 368 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 PGPEP1Q9NXJ5 209 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 SLC5A4Q9NY91 659 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 MYH8P13535 1937 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 ALPK3Q96L96 1907 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 TTC41PQ6P2S7 1318 aa11.24□□□□□ -0.61
TRIO-220ENST00000512979 A0A1W2PPC1 479 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 MSCO60682 206 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 SLC25A27O95847 323 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 IGHA2P01877 340 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 CYBAP13498 195 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 RRP1P56182 461 aaKnown RBP11.23□□□□□ -0.61
TRIO-220ENST00000512979 LIAT1Q6ZQX7 453 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 PI4K2BQ8TCG2 481 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 FSD1Q9BTV5 496 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 PPP1R9AQ9ULJ8 1098 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 ROBO3Q96MS0 1386 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 RLFQ13129 1914 aa11.23□□□□□ -0.61
TRIO-220ENST00000512979 VWA5AO00534 786 aa11.22□□□□□ -0.61
TRIO-220ENST00000512979 PRDM1O75626 825 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms