RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ISY1Q9ULR0 285 aaKnown RBP13.75□□□□□ -0.21
RNF4-216ENST00000511859 LCTP09848 1927 aa13.75□□□□□ -0.21
RNF4-216ENST00000511859 CXCL10P02778 98 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 CHGBP05060 677 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 TSPY3P0CV98 308 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 TSPY8P0CW00 308 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 SELPP16109 830 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 ALDH5A1P51649 535 aaPredicted RBP13.74□□□□□ -0.21
RNF4-216ENST00000511859 DEFB103AP81534 67 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 IKBKEQ14164 716 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 GPNMBQ14956 572 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 PTGISQ16647 500 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 PTPROQ16827 1216 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 PPP4R3BQ5MIZ7 849 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 RCSD1Q6JBY9 416 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 TMCO2Q7Z6W1 182 aaPredicted RBP13.74□□□□□ -0.21
RNF4-216ENST00000511859 NEDD1Q8NHV4 660 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 MPHOSPH6Q99547 160 aaKnown RBP13.74□□□□□ -0.21
RNF4-216ENST00000511859 INSL6Q9Y581 213 aa13.74□□□□□ -0.21
RNF4-216ENST00000511859 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 ST18O60284 1047 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 RAB11FIP3O75154 756 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 MCCP23508 829 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 PPP2R5BQ15173 497 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 HFE2Q6ZVN8 426 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 SESTD1Q86VW0 696 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 FBXO22Q8NEZ5 403 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
RNF4-216ENST00000511859 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
RNF4-216ENST00000511859 CCPG1Q9ULG6 757 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 PRR12Q9ULL5 1215 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 TECTAO75443 2155 aa13.73□□□□□ -0.21
RNF4-216ENST00000511859 PRDM1O75626 825 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 ICAM1P05362 532 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 GNAT2P19087 354 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 ZP2Q05996 745 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 PDE4BQ07343 736 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 RBL2Q08999 1139 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 BAATQ14032 418 aaPredicted RBP13.72□□□□□ -0.21
RNF4-216ENST00000511859 LRRC8DQ7L1W4 858 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 ADHFE1Q8IWW8 467 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 SCFD2Q8WU76 684 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 PABPC5Q96DU9 382 aaKnown RBP13.72□□□□□ -0.21
RNF4-216ENST00000511859 SAMD11Q96NU1 681 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 CACNA1HO95180 2353 aa13.72□□□□□ -0.21
RNF4-216ENST00000511859 H3BQ06 376 aaPredicted RBP13.71□□□□□ -0.21
RNF4-216ENST00000511859 NCK2O43639 380 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 HMMRO75330 724 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 RLBP1P12271 317 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 FOXK2Q01167 660 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 TIGD5Q53EQ6 642 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 MICAL3Q7RTP6 2002 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 PPP1R13LQ8WUF5 828 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 PRRX2Q99811 253 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 BCL11AQ9H165 835 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 SPTBN4Q9H254 2564 aa13.71□□□□□ -0.21
RNF4-216ENST00000511859 B4DLN1 442 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 NBNO60934 754 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 TXNP10599 105 aaKnown RBP13.71□□□□□ -0.22
RNF4-216ENST00000511859 CKBP12277 381 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 TDO2P48775 406 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.22
RNF4-216ENST00000511859 SNAP25P60880 206 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 TFAP4Q01664 338 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 PDE4DQ08499 809 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 COL19A1Q14993 1142 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 PKN1Q16512 942 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 KCTD1Q719H9 257 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 BANK1Q8NDB2 785 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 C17orf80Q9BSJ5 609 aa13.71□□□□□ -0.22
RNF4-216ENST00000511859 ZFHX2Q9C0A1 2572 aaPredicted RBP13.7□□□□□ -0.22
RNF4-216ENST00000511859 PTPDC1A2A3K4 754 aa13.7□□□□□ -0.22
RNF4-216ENST00000511859 PATL2C9JE40 543 aaKnown RBP13.7□□□□□ -0.22
RNF4-216ENST00000511859 APPP05067 770 aa13.7□□□□□ -0.22
RNF4-216ENST00000511859 SLC3A2P08195 630 aaKnown RBP13.7□□□□□ -0.22
RNF4-216ENST00000511859 PTPN5P54829 565 aa13.7□□□□□ -0.22
RNF4-216ENST00000511859 CHMP4BP1P59074 171 aa13.7□□□□□ -0.22
RNF4-216ENST00000511859 HTRA4P83105 476 aaPredicted RBP13.7□□□□□ -0.22
RNF4-216ENST00000511859 EPC2Q52LR7 807 aa13.7□□□□□ -0.22
RNF4-216ENST00000511859 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
RNF4-216ENST00000511859 GDF6Q6KF10 455 aaPredicted RBP13.7□□□□□ -0.22
RNF4-216ENST00000511859 BMP8AQ7Z5Y6 402 aa13.7□□□□□ -0.22
RNF4-216ENST00000511859 DNERQ8NFT8 737 aa13.7□□□□□ -0.22
RNF4-216ENST00000511859 CTAGE1Q96RT6 745 aa13.7□□□□□ -0.22
RNF4-216ENST00000511859 POP1Q99575 1024 aaKnown RBP13.7□□□□□ -0.22
RNF4-216ENST00000511859 PNMA2Q9UL42 364 aa13.7□□□□□ -0.22
RNF4-216ENST00000511859 H3BNC9 293 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 CASTP20810 708 aaKnown RBP13.69□□□□□ -0.22
RNF4-216ENST00000511859 EDNRBP24530 442 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 IRS1P35568 1242 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 FAM117BQ6P1L5 589 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 RNF207Q6ZRF8 634 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 EP400NLQ6ZTU2 488 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 IFNL3Q8IZI9 196 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 APPBP2Q92624 585 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 COPS5Q92905 334 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 OSBP2Q969R2 916 aa13.69□□□□□ -0.22
RNF4-216ENST00000511859 RANBP17Q9H2T7 1088 aaKnown RBP13.69□□□□□ -0.22
RNF4-216ENST00000511859 EPB41L4AQ9HCS5 686 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms