RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 BAZ2BQ9UIF8 2168 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 PIK3CDO00329 1044 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 DNM1LO00429 736 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 PRPF3O43395 683 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 DUSP11O75319 330 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 PGK1P00558 417 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 MYCNP04198 464 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 NR3C2P08235 984 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 SCG2P13521 617 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 NAPAP54920 295 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 TNFAIP2Q03169 654 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 SSRP1Q08945 709 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 STK3Q13188 491 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 LRRC41Q15345 812 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 NTRK3Q16288 839 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 WWC2Q6AWC2 1192 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 TAPT1Q6NXT6 567 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 PPP1R18Q6NYC8 613 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 NOL8Q76FK4 1167 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 RNF180Q86T96 592 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 TEX2Q8IWB9 1127 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 FBXO16Q8IX29 292 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 TRIM22Q8IYM9 498 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 GPKOWQ92917 476 aaPredicted RBP eCLIP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 PAWRQ96IZ0 340 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 PDCD2LQ9BRP1 358 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 SLC26A6Q9BXS9 759 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 RNF26Q9BY78 433 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 C11orf49Q9H6J7 331 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 SPC25Q9HBM1 224 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 NCOA5Q9HCD5 579 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 PDGFCQ9NRA1 345 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 BARHL2Q9NY43 387 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 DDX49Q9Y6V7 483 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 PLXNA1Q9UIW2 1896 aa8.23□□□□□ -1.09
PDLIM5-215ENST00000511586 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 RBM47A0AV96 593 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 SMCO2A6NFE2 343 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 KBTBD13C9JR72 458 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 STXBP3O00186 592 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 MEIS2O14770 477 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 PFKFB2O60825 505 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 EIF3JO75822 258 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 CDKL5O76039 1030 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 ADCYAP1R1P41586 468 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 MNX1P50219 401 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 ADCY7P51828 1080 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 SCRN1Q12765 414 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 PGM5Q15124 567 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 PKN1Q16512 942 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 GJC2Q5T442 439 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 USP17L6PQ6QN14 398 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 VSIG10LQ86VR7 867 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 IL27Q8NEV9 243 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 DIS3LQ8TF46 1054 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 SCFD2Q8WU76 684 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 CCDC12Q8WUD4 166 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 PHKBQ93100 1093 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 LENG1Q96BZ8 264 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 HTATIP2Q9BUP3 242 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 WDR11Q9BZH6 1224 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 AP5M1Q9H0R1 490 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 GLT8D2Q9H1C3 349 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 RIC8AQ9NPQ8 531 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 GNEQ9Y223 722 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 Q9Y3F1 56 aa8.22□□□□□ -1.09
PDLIM5-215ENST00000511586 MYH6P13533 1939 aa8.21□□□□□ -1.09
PDLIM5-215ENST00000511586 SPDYE3A6NKU9 549 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 NKRFO15226 690 aaKnown RBP eCLIP8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 DYNC1LI2O43237 492 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 ADCY6O43306 1168 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 ADAMTS4O75173 837 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 STAM2O75886 525 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 FOSP01100 380 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 C6orf222P0C671 652 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 COL6A1P12109 1028 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 MYCLP12524 364 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 SMPD1P17405 629 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 CST5P28325 142 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 CCND2P30279 289 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 GJA9P57773 515 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 NKX3-2P78367 333 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 TTLL4Q14679 1199 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 UBE2SQ16763 222 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 ME3Q16798 604 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 DUSP28Q4G0W2 176 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 GNASQ5JWF2 1037 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 TYW1BQ6NUM6 668 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 XRRA1Q6P2D8 792 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 SEPT14Q6ZU15 432 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 TLK2Q86UE8 772 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 KLHDC9Q8NEP7 349 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 DPF3Q92784 378 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 KIF2CQ99661 725 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 TSEN34Q9BSV6 310 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 SENP6Q9GZR1 1112 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 UPF3AQ9H1J1 476 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 EHMT1Q9H9B1 1298 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 PCDHA6Q9UN73 950 aa8.21□□□□□ -1.1
PDLIM5-215ENST00000511586 LIMCH1Q9UPQ0 1083 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms