RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 SYNPO2Q9UMS6 1093 aa9.16□□□□□ -0.94
SMAD1-209ENST00000511125 ZBTB48P10074 688 aaPredicted RBP9.15□□□□□ -0.94
SMAD1-209ENST00000511125 CHMP4BP1P59074 171 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 IL17AQ16552 155 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 SEPT14Q6ZU15 432 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 GPRC5AQ8NFJ5 357 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 WDR11Q9BZH6 1224 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 ARHGAP39Q9C0H5 1083 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 POLD4Q9HCU8 107 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 HTTP42858 3142 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 POTEMA6NI47 508 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 NEMFO60524 1076 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 NR1I2O75469 434 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 ARP10275 920 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 SLC39A14Q15043 492 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 PTPAQ15257 358 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 CKAP2LQ8IYA6 745 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 CYP39A1Q9NYL5 469 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
SMAD1-209ENST00000511125 PHIPQ8WWQ0 1821 aa9.15□□□□□ -0.95
SMAD1-209ENST00000511125 POTEB2H3BUK9 544 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 MYCNP04198 464 aaPredicted RBP9.14□□□□□ -0.95
SMAD1-209ENST00000511125 CASP1P29466 404 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 TMEM63BQ5T3F8 832 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 CCDC102AQ96A19 550 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 SH2D3AQ9BRG2 576 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 DACT1Q9NYF0 836 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 RCOR1Q9UKL0 485 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 TELO2Q9Y4R8 837 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 DDX11L8A8MPP1 907 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 PLA2G6O60733 806 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 CYP2B6P20813 491 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 CLK2P49760 499 aaKnown RBP9.14□□□□□ -0.95
SMAD1-209ENST00000511125 NDUFA8P51970 172 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 KCTD2Q14681 263 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 CALCRLQ16602 461 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 GRAMD1CQ8IYS0 662 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 MMP19Q99542 508 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.14□□□□□ -0.95
SMAD1-209ENST00000511125 MKI67P46013 3256 aaKnown RBP9.14□□□□□ -0.95
SMAD1-209ENST00000511125 MANSC4A6NHS7 340 aaPredicted RBP9.14□□□□□ -0.95
SMAD1-209ENST00000511125 DPP9Q86TI2 863 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 PLA2G4DQ86XP0 818 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 PPP1R13LQ8WUF5 828 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 PARK7Q99497 189 aaKnown RBP9.14□□□□□ -0.95
SMAD1-209ENST00000511125 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 ADAMTS5Q9UNA0 930 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 IVNS1ABPQ9Y6Y0 642 aa9.14□□□□□ -0.95
SMAD1-209ENST00000511125 ESYT2A0FGR8 921 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 CYP4A11Q02928 519 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 PRAMEF19Q5SWL8 479 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 GJC2Q5T442 439 aaPredicted RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 SHC4Q6S5L8 630 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 MCF2L2Q86YR7 1114 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 DAGLBQ8NCG7 672 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 TTC12Q9H892 705 aaPredicted RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 RABGAP1Q9Y3P9 1069 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 PAPPA2Q9BXP8 1791 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 hCG_1984214I3L0E3 225 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 KARSQ15046 597 aaKnown RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 NCAPH2Q6IBW4 605 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 GALNT17Q6IS24 598 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 ANKRD23Q86SG2 305 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 ZNF713Q8N859 430 aaPredicted RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 KRI1Q8N9T8 703 aaKnown RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 DHX58Q96C10 678 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 BMP2KQ9NSY1 1161 aaPredicted RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 SAMM50Q9Y512 469 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 COL11A1P12107 1806 aaPredicted RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 ASTN1O14525 1302 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 MEIS1O00470 390 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 FOXN1O15353 648 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 SSBP05455 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 NR3C2P08235 984 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 FCER1AP12319 257 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 ITGB5P18084 799 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 ADORA2AP29274 412 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 AFMP43652 599 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 NASPP49321 788 aaPredicted RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 MRPS9P82933 396 aaKnown RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 DTHD1Q6ZMT9 781 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 SYMPKQ92797 1274 aaKnown RBP9.13□□□□□ -0.95
SMAD1-209ENST00000511125 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 TMEM63CQ9P1W3 806 aa9.13□□□□□ -0.95
SMAD1-209ENST00000511125 BIN1O00499 593 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 POLR2DO15514 142 aaKnown RBP9.12□□□□□ -0.95
SMAD1-209ENST00000511125 ATP9AO75110 1047 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 UBE2HP62256 183 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 RAD51AP2Q09MP3 1159 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 PGM5Q15124 567 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 AXDND1Q5T1B0 1012 aaPredicted RBP9.12□□□□□ -0.95
SMAD1-209ENST00000511125 PPP1R18Q6NYC8 613 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 RIOX2Q8IUF8 465 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 KCNG4Q8TDN1 519 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 PXMP2Q9NR77 195 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 CREBZFQ9NS37 354 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 FBXO2Q9UK22 296 aaPredicted RBP9.12□□□□□ -0.95
SMAD1-209ENST00000511125 PTPRFP10586 1907 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 DOCK3Q8IZD9 2030 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 SYCE3A1L190 88 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms