RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 ANXA1P04083 346 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 NEFMP07197 916 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 ICAM3P32942 547 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 RIPPLY3P57055 190 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 EIF4A1P60842 406 aaKnown RBP7.82□□□□□ -1.16
CLCN3-207ENST00000511092 ATP2B2Q01814 1243 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 COL28A1Q2UY09 1125 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 FOXD4L5Q5VV16 416 aaPredicted RBP7.82□□□□□ -1.16
CLCN3-207ENST00000511092 LYSMD3Q7Z3D4 306 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 LRP10Q7Z4F1 713 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 DTWD2Q8NBA8 298 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 EDC3Q96F86 508 aaKnown RBP7.82□□□□□ -1.16
CLCN3-207ENST00000511092 POM121Q96HA1 1249 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 OSBPL3Q9H4L5 887 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 CD209Q9NNX6 404 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 DOLKQ9UPQ8 538 aa7.82□□□□□ -1.16
CLCN3-207ENST00000511092 ZNFX1Q9P2E3 1918 aaKnown RBP7.82□□□□□ -1.16
CLCN3-207ENST00000511092 SLC35F4A4IF30 521 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 LINC01565O15544 149 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 TRAK2O60296 914 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 SOX11P35716 441 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 CCR10P46092 362 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 RNF144AP50876 292 aaPredicted RBP7.81□□□□□ -1.16
CLCN3-207ENST00000511092 C19orf57Q0VDD7 668 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 TSGA10IPQ3SY00 556 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 PRICKLE2Q7Z3G6 844 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 FAM126BQ8IXS8 530 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 CCDC155Q8N6L0 562 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.81□□□□□ -1.16
CLCN3-207ENST00000511092 TDRD7Q8NHU6 1098 aaKnown RBP7.81□□□□□ -1.16
CLCN3-207ENST00000511092 MRPL38Q96DV4 380 aaKnown RBP7.81□□□□□ -1.16
CLCN3-207ENST00000511092 RPGRIP1Q96KN7 1286 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 PLEKHF1Q96S99 279 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 XPNPEP3Q9NQH7 507 aa7.81□□□□□ -1.16
CLCN3-207ENST00000511092 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.81□□□□□ -1.16
CLCN3-207ENST00000511092 MAST3O60307 1309 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 SALL1Q9NSC2 1324 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 BRD1O95696 1058 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 MAPK4P31152 587 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 GTF2F1P35269 517 aaKnown RBP eCLIP7.8□□□□□ -1.16
CLCN3-207ENST00000511092 CDK7P50613 346 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 ACLYP53396 1101 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 ERVK-21P61565 698 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 USP4Q13107 963 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 NFE2L2Q16236 605 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 SCYL3Q8IZE3 742 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 PHTF2Q8N3S3 785 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 FLCNQ8NFG4 579 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 GATA6Q92908 595 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 SLC9A7Q96T83 725 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 HIPK3Q9H422 1215 aa7.8□□□□□ -1.16
CLCN3-207ENST00000511092 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.8□□□□□ -1.16
CLCN3-207ENST00000511092 SETD2Q9BYW2 2564 aaPredicted RBP7.8□□□□□ -1.16
CLCN3-207ENST00000511092 NBPF19A0A087WUL8 3843 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 DNHD1Q96M86 4753 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 SNAP23O00161 211 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 TOP3BO95985 862 aaKnown RBP7.79□□□□□ -1.16
CLCN3-207ENST00000511092 CRKP46108 304 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 GRIK5Q16478 980 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 TIGD5Q53EQ6 642 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 OXLD1Q5BKU9 147 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 DEFB128Q7Z7B8 93 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 ZFPM1Q8IX07 1006 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 GPRC5AQ8NFJ5 357 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 C17orf80Q9BSJ5 609 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 PNNQ9H307 717 aaKnown RBP7.79□□□□□ -1.16
CLCN3-207ENST00000511092 ARHGEF10LQ9HCE6 1279 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 INCENPQ9NQS7 918 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 CD207Q9UJ71 328 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 MINPP1Q9UNW1 487 aa7.79□□□□□ -1.16
CLCN3-207ENST00000511092 TTF2Q9UNY4 1162 aaKnown RBP7.79□□□□□ -1.16
CLCN3-207ENST00000511092 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-207ENST00000511092 LINC01553A4QN01 128 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 MYADML2A6NDP7 307 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 TMEM8BA6NDV4 472 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 PHF20L1A8MW92 1017 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 IRS4O14654 1257 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-207ENST00000511092 GPC1P35052 558 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 CLCN5P51795 746 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 ERVK-24P63145 666 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 CLN3Q13286 438 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 KREMEN2Q8NCW0 462 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 TGS1Q96RS0 853 aaKnown RBP7.78□□□□□ -1.16
CLCN3-207ENST00000511092 PAGR1Q9BTK6 254 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 RAB6BQ9NRW1 208 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 RBPJLQ9UBG7 517 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 SERPINA10Q9UK55 444 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 NAV3Q8IVL0 2385 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 MAPK8IP3Q9UPT6 1336 aa7.78□□□□□ -1.16
CLCN3-207ENST00000511092 PTPRQQ9UMZ3 2332 aa7.77□□□□□ -1.17
CLCN3-207ENST00000511092 CD4P01730 458 aa7.77□□□□□ -1.17
CLCN3-207ENST00000511092 NTRK1P04629 796 aa7.77□□□□□ -1.17
CLCN3-207ENST00000511092 HOXD8P13378 290 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-207ENST00000511092 RHOQP17081 205 aa7.77□□□□□ -1.17
CLCN3-207ENST00000511092 EIF2S2P20042 333 aaKnown RBP7.77□□□□□ -1.17
CLCN3-207ENST00000511092 ITGA6P23229 1130 aa7.77□□□□□ -1.17
CLCN3-207ENST00000511092 SP100P23497 879 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-207ENST00000511092 HMGCS2P54868 508 aa7.77□□□□□ -1.17
CLCN3-207ENST00000511092 KRT76Q01546 638 aa7.77□□□□□ -1.17
CLCN3-207ENST00000511092 HYAL1Q12794 435 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms