RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 RNF180Q86T96 592 aa13.58□□□□□ -0.24
HMGXB3-203ENST00000510472 UPF3BQ9BZI7 483 aaKnown RBP13.58□□□□□ -0.24
HMGXB3-203ENST00000510472 SENP6Q9GZR1 1112 aaPredicted RBP13.58□□□□□ -0.24
HMGXB3-203ENST00000510472 ALDH8A1Q9H2A2 487 aaPredicted RBP13.58□□□□□ -0.24
HMGXB3-203ENST00000510472 PXMP2Q9NR77 195 aa13.58□□□□□ -0.24
HMGXB3-203ENST00000510472 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.24
HMGXB3-203ENST00000510472 CNTNAP5Q8WYK1 1306 aa13.58□□□□□ -0.24
HMGXB3-203ENST00000510472 BAZ2BQ9UIF8 2168 aaKnown RBP13.58□□□□□ -0.24
HMGXB3-203ENST00000510472 PLXNA1Q9UIW2 1896 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 CCDC196A0A1B0GTZ2 297 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 B4DLN1 442 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 NR3C2P08235 984 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 PTGS1P23219 599 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 MRPL12P52815 198 aaKnown RBP13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 FGD1P98174 961 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 PDE4DQ08499 809 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 SNX17Q15036 470 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 NTRK3Q16288 839 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 LRRC26Q2I0M4 334 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 C1orf53Q5VUE5 145 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 TYW1BQ6NUM6 668 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 CCDC62Q6P9F0 684 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 VSIG10LQ86VR7 867 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 DPF3Q92784 378 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 PDCD2LQ9BRP1 358 aa13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 SEC63Q9UGP8 760 aaKnown RBP13.57□□□□□ -0.24
HMGXB3-203ENST00000510472 KBTBD13C9JR72 458 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 H0YGN5 161 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 RGS20O76081 388 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 METAP2P50579 478 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 STXBP2Q15833 593 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 KCNA10Q16322 511 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 ARHGEF16Q5VV41 709 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 SLC39A5Q6ZMH5 540 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 ZNF274Q96GC6 653 aaPredicted RBP13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 MPHOSPH6Q99547 160 aaKnown RBP13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 WDR11Q9BZH6 1224 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 PDRG1Q9NUG6 133 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 FRMPD4Q14CM0 1322 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 LCTP09848 1927 aa13.56□□□□□ -0.24
HMGXB3-203ENST00000510472 MOXD2PA6NHM9 499 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 DYNC1LI2O43237 492 aaPredicted RBP13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 EVI5O60447 810 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 EIF2AK2P19525 551 aaKnown RBP13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 ACLYP53396 1101 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 PGM5Q15124 567 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 PKN1Q16512 942 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 GNASQ5JWF2 1037 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 USP17L6PQ6QN14 398 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 TLK2Q86UE8 772 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 TEX2Q8IWB9 1127 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 IL31RAQ8NI17 732 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 SCFD2Q8WU76 684 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 PSTPIP2Q9H939 334 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 NR2E3Q9Y5X4 410 aa13.55□□□□□ -0.24
HMGXB3-203ENST00000510472 A0A1W2PQ45 241 aaPredicted RBP13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 A0A1W2PQY0 241 aa13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 NKRFO15226 690 aaKnown RBP eCLIP13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 PRPF3O43395 683 aaKnown RBP13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 ARIH2O95376 493 aa13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 ASGR1P07306 291 aa13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 C6orf222P0C671 652 aaPredicted RBP13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 IFNAR1P17181 557 aa13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 FCHSD1Q86WN1 690 aa13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 PCSK9Q8NBP7 692 aaKnown RBP13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 GPKOWQ92917 476 aaPredicted RBP eCLIP13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 FERMT2Q96AC1 680 aa13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 SPC25Q9HBM1 224 aa13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 BARHL2Q9NY43 387 aa13.54□□□□□ -0.24
HMGXB3-203ENST00000510472 hCG_1984214I3L0E3 225 aa13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 STXBP3O00186 592 aa13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 TXNP10599 105 aaKnown RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 CDK7P50613 346 aa13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 MRPS9P82933 396 aaKnown RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 BEX3Q00994 111 aa13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 FSCN1Q16658 493 aaKnown RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 PFKFB3Q16875 520 aaPredicted RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 NOL8Q76FK4 1167 aaKnown RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 HEATR3Q7Z4Q2 680 aa13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 ZNF713Q8N859 430 aaPredicted RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 AP5M1Q9H0R1 490 aa13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 NCOA5Q9HCD5 579 aaKnown RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 DDX41Q9UJV9 622 aaKnown RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 NAP1L2Q9ULW6 460 aaPredicted RBP13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 ELP1O95163 1332 aa13.53□□□□□ -0.24
HMGXB3-203ENST00000510472 MCM3APO60318 1980 aa13.52□□□□□ -0.24
HMGXB3-203ENST00000510472 A6NJR5 290 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 SCG2P13521 617 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 RTP1P59025 263 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 TTLL4Q14679 1199 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 XRRA1Q6P2D8 792 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 SEPT14Q6ZU15 432 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 SLC43A3Q8NBI5 491 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms