RNA–Protein interactions for RNA: ENST00000509870.1

HOXC-AS3-201, HOXC cluster antisense RNA 3, humanhuman

TSL 4 BASIC

Gene HOXC-AS3, Length 544 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC-AS3-201ENST00000509870 PTGS1P23219 599 aa17.58■□□□□ 0.4
HOXC-AS3-201ENST00000509870 HSD17B4P51659 736 aa17.58■□□□□ 0.4
HOXC-AS3-201ENST00000509870 GHRHRQ02643 423 aa17.58■□□□□ 0.4
HOXC-AS3-201ENST00000509870 ARHGEF16Q5VV41 709 aa17.58■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CASC1Q6TDU7 716 aa17.58■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CHST3Q7LGC8 479 aa17.58■□□□□ 0.4
HOXC-AS3-201ENST00000509870 TMEM199Q8N511 208 aa17.58■□□□□ 0.4
HOXC-AS3-201ENST00000509870 OR6J1Q8NGC5 347 aa17.58■□□□□ 0.4
HOXC-AS3-201ENST00000509870 LCTP09848 1927 aa17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 GRIN2DO15399 1336 aa17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PNMA6FA0A0J9YX94 578 aa17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 A6NJR5 290 aa17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 EIF3JO75822 258 aaKnown RBP17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 MCM5P33992 734 aa17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 ANTXR2P58335 489 aa17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PURAQ00577 322 aaKnown RBP17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PPIGQ13427 754 aaKnown RBP eCLIP17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 TMEM87BQ96K49 555 aa17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SENP2Q9HC62 589 aa17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 COL20A1Q9P218 1284 aa17.57■□□□□ 0.4
HOXC-AS3-201ENST00000509870 LAMA3Q16787 3333 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 LRRC37A2A6NM11 1700 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PPP1R11O60927 126 aaPredicted RBP17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SUPT20HL2P0C7V6 817 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SMARCA1P28370 1054 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 KIF5BP33176 963 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 EPHB4P54760 987 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 NECTIN1Q15223 517 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CCDC62Q6P9F0 684 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 HOMER1Q86YM7 354 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 RNPC3Q96LT9 517 aaKnown RBP17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PIGSQ96S52 555 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 MTG1Q9BT17 334 aaPredicted RBP17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 ANO2Q9NQ90 1003 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 MTMR10Q9NXD2 777 aa17.56■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SZT2Q5T011 3432 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 OPLAHO14841 1288 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SLC27A2O14975 620 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PRC1O43663 620 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 DDAH1O94760 285 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 NR3C2P08235 984 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 MYL3P08590 195 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PSMC6P62333 389 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 RNF20Q5VTR2 975 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CREB3L3Q68CJ9 461 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SEPT14Q6ZU15 432 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 Q7L0L9 218 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CTCFLQ8NI51 663 aaPredicted RBP17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 LY9Q9HBG7 655 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PXMP2Q9NR77 195 aa17.55■□□□□ 0.4
HOXC-AS3-201ENST00000509870 GCOM1H8Y6P7 765 aaPredicted RBP17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CYTH3O43739 400 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 GH1P01241 217 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 POLR2MP0CAP2 368 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 EIF2AK2P19525 551 aaKnown RBP17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 LIFRP42702 1097 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 GNAQP50148 359 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SLC35G1Q2M3R5 365 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 NFXL1Q6ZNB6 911 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 ZNF654Q8IZM8 581 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 TRPV6Q9H1D0 765 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 HIPK3Q9H422 1215 aa17.54■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CCDC69A6NI79 296 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 B4GALT4O60513 344 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 ARIH2O95376 493 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CALM1P0DP23 149 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CALM2P0DP24 149 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CALM3P0DP25 149 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CSF2RAP15509 400 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 NFRKBQ6P4R8 1299 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 KCNV1Q6PIU1 500 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 COPS5Q92905 334 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PDCD2LQ9BRP1 358 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SPZ1Q9BXG8 430 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PPP1R12CQ9BZL4 782 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 STXBP5LQ9Y2K9 1186 aa17.53■□□□□ 0.4
HOXC-AS3-201ENST00000509870 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 SH2B2O14492 632 aaPredicted RBP17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 HOXA13P31271 388 aaPredicted RBP17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 CYP2C18P33260 490 aa17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 PTPN11Q06124 597 aaPredicted RBP17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 LY6KQ17RY6 165 aa17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 NBPF20Q3BBV1 942 aa17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 ZNF697Q5TEC3 545 aa17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 VSIG10LQ86VR7 867 aa17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 RRP36Q96EU6 259 aaKnown RBP17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 NOC4LQ9BVI4 516 aaKnown RBP17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 DDX41Q9UJV9 622 aaKnown RBP17.52■□□□□ 0.4
HOXC-AS3-201ENST00000509870 TGFB3P10600 412 aa17.51■□□□□ 0.39
HOXC-AS3-201ENST00000509870 CASTP20810 708 aaKnown RBP17.51■□□□□ 0.39
HOXC-AS3-201ENST00000509870 LAMC2Q13753 1193 aa17.51■□□□□ 0.39
HOXC-AS3-201ENST00000509870 TMEM240Q5SV17 173 aa17.51■□□□□ 0.39
HOXC-AS3-201ENST00000509870 PSRC1Q6PGN9 363 aaPredicted RBP17.51■□□□□ 0.39
HOXC-AS3-201ENST00000509870 C16orf59Q7L2K0 433 aa17.51■□□□□ 0.39
HOXC-AS3-201ENST00000509870 AFG1LQ8WV93 481 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms