RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	EDA	Q92838	391 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	C17orf80	Q9BSJ5	609 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	MTG1	Q9BT17	334 aa	Predicted RBP	10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	LNPK	Q9C0E8	428 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	ACAD9	Q9H845	621 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	ARMT1	Q9H993	441 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	A1CF	Q9NQ94	594 aa	Known RBP	10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	ECHDC1	Q9NTX5	307 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	CTNNA3	Q9UI47	895 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	ZNF532	Q9HCE3	1301 aa		10.22	□□□□□ -0.77
RACK1-222	ENST00000509535	TMEM221	A6NGB7	291 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535		M0R296	226 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	PRKAB2	O43741	272 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	CPT1A	P50416	773 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	OAZ1	P54368	228 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	PDE1A	P54750	535 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	GPNMB	Q14956	572 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	PKN1	Q16512	942 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	PTPRO	Q16827	1216 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	NFRKB	Q6P4R8	1299 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	CNKSR3	Q6P9H4	555 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	ERMP1	Q7Z2K6	904 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	PLEKHM2	Q8IWE5	1019 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	AMOTL1	Q8IY63	956 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	BANK1	Q8NDB2	785 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	PI4K2B	Q8TCG2	481 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	POP1	Q99575	1024 aa	Known RBP	10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	VTA1	Q9NP79	307 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	GPHN	Q9NQX3	736 aa	Predicted RBP	10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	CLDND1	Q9NY35	253 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	NOD1	Q9Y239	953 aa		10.21	□□□□□ -0.77
RACK1-222	ENST00000509535	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.21	□□□□□ -0.78
RACK1-222	ENST00000509535	KIAA1217	Q5T5P2	1943 aa		10.21	□□□□□ -0.78
RACK1-222	ENST00000509535	MYO10	Q9HD67	2058 aa		10.21	□□□□□ -0.78
RACK1-222	ENST00000509535	TCRBV5S4A2T	A0A5A2	114 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	MX1	P20591	662 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	COL4A6	Q14031	1691 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	COL19A1	Q14993	1142 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	TTF1	Q15361	905 aa	Predicted RBP	10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	SMAD2	Q15796	467 aa	Known RBP	10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	CLUL1	Q15846	466 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	TCTN1	Q2MV58	587 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	DUSP28	Q4G0W2	176 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	TCEAL5	Q5H9L2	206 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	TRIM67	Q6ZTA4	783 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	CCDC155	Q8N6L0	562 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	AFAP1L1	Q8TED9	768 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	HAUS7	Q99871	368 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	ATP8A2	Q9NTI2	1148 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	RNF146	Q9NTX7	359 aa		10.2	□□□□□ -0.78
RACK1-222	ENST00000509535	EP300	Q09472	2414 aa	Predicted RBP	10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	MBD4	O95243	580 aa		10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	LTBR	P36941	435 aa		10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	PTPN11	Q06124	597 aa	Predicted RBP	10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	FBXL6	Q8N531	539 aa		10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	CAGE1	Q8TC20	777 aa		10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	ATOH1	Q92858	354 aa	Predicted RBP	10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	WDR11	Q9BZH6	1224 aa		10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	ALG13	Q9NP73	1137 aa	Known RBP	10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	NYAP2	Q9P242	653 aa		10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	FEM1B	Q9UK73	627 aa		10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	INSL6	Q9Y581	213 aa		10.19	□□□□□ -0.78
RACK1-222	ENST00000509535	NCOR2	Q9Y618	2525 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	RBAK-RBAKDN	I3L0D1	243 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	GOLIM4	O00461	696 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	MBTPS2	O43462	519 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	EFCAB14	O75071	495 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	CHGB	P05060	677 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	SELP	P16109	830 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	CHMP4BP1	P59074	171 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	IKBKE	Q14164	716 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	PTGIS	Q16647	500 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	SLFNL1	Q499Z3	407 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	EPC2	Q52LR7	807 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	BRDT	Q58F21	947 aa	Predicted RBP	10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	LRRC8D	Q7L1W4	858 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	RPAIN	Q86UA6	219 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	TICAM2	Q86XR7	235 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	OR6J1	Q8NGC5	347 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	GPATCH3	Q96I76	525 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	TRERF1	Q96PN7	1200 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	IRF2BPL	Q9H1B7	796 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	BOLA2	Q9H3K6	86 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	NSUN3	Q9H649	340 aa	Known RBP	10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	CYP39A1	Q9NYL5	469 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	CLIP2	Q9UDT6	1046 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	DMD	P11532	3685 aa		10.18	□□□□□ -0.78
RACK1-222	ENST00000509535	KIAA1671	Q9BY89	1806 aa		10.17	□□□□□ -0.78
RACK1-222	ENST00000509535	RAD50	Q92878	1312 aa		10.17	□□□□□ -0.78
RACK1-222	ENST00000509535		H3BNC9	293 aa		10.17	□□□□□ -0.78
RACK1-222	ENST00000509535	STXBP3	O00186	592 aa		10.17	□□□□□ -0.78
RACK1-222	ENST00000509535	NBN	O60934	754 aa		10.17	□□□□□ -0.78
RACK1-222	ENST00000509535	PARN	O95453	639 aa	Known RBP	10.17	□□□□□ -0.78
RACK1-222	ENST00000509535	CXCL10	P02778	98 aa		10.17	□□□□□ -0.78
RACK1-222	ENST00000509535	FDX1	P10109	184 aa		10.17	□□□□□ -0.78
RACK1-222	ENST00000509535	ALAS1	P13196	640 aa		10.17	□□□□□ -0.78
RACK1-222	ENST00000509535	VCP	P55072	806 aa	Known RBP	10.17	□□□□□ -0.78

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