RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 ITGA1P56199 1179 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 ZNF445P59923 1031 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 PSMD2Q13200 908 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 EEF1DP3Q658K8 133 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 WWC2Q6AWC2 1192 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 DNAJC10Q8IXB1 793 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 Q8TCH9 128 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 MBD6Q96DN6 1003 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 ZNF503Q96F45 646 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 IKZF4Q9H2S9 585 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 RWDD3Q9Y3V2 267 aa4.36□□□□□ -1.71
XRCC4-204ENST00000509268 A0A087WZG4 1122 aa4.35□□□□□ -1.71
XRCC4-204ENST00000509268 GREM1O60565 184 aa4.35□□□□□ -1.71
XRCC4-204ENST00000509268 ZNF28P17035 718 aa4.35□□□□□ -1.71
XRCC4-204ENST00000509268 MCM7P33993 719 aa4.35□□□□□ -1.71
XRCC4-204ENST00000509268 ATXN1P54253 815 aaKnown RBP4.35□□□□□ -1.71
XRCC4-204ENST00000509268 PRAMEF18Q5VWM3 479 aa4.35□□□□□ -1.71
XRCC4-204ENST00000509268 CD300LDQ6UXZ3 194 aa4.35□□□□□ -1.71
XRCC4-204ENST00000509268 MIB1Q86YT6 1006 aa4.35□□□□□ -1.71
XRCC4-204ENST00000509268 YTHDC1Q96MU7 727 aaKnown RBP4.35□□□□□ -1.71
XRCC4-204ENST00000509268 SLC9A7Q96T83 725 aa4.35□□□□□ -1.71
XRCC4-204ENST00000509268 TMEM168Q9H0V1 697 aa4.35□□□□□ -1.71
XRCC4-204ENST00000509268 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.35□□□□□ -1.71
XRCC4-204ENST00000509268 SUPT16HQ9Y5B9 1047 aaKnown RBP4.35□□□□□ -1.71
XRCC4-204ENST00000509268 ZNF202O95125 648 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 IFNGR1P15260 489 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 INHBCP55103 352 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 PRKD1Q15139 912 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-204ENST00000509268 EAPPQ56P03 285 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-204ENST00000509268 RNF207Q6ZRF8 634 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 FIBCD1Q8N539 461 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 USP33Q8TEY7 942 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 TRIM8Q9BZR9 551 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 GP6Q9HCN6 339 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 FBLN5Q9UBX5 448 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 PARP2Q9UGN5 583 aa4.34□□□□□ -1.71
XRCC4-204ENST00000509268 DIS3Q9Y2L1 958 aaKnown RBP4.34□□□□□ -1.71
XRCC4-204ENST00000509268 C9IYK1 514 aa4.33□□□□□ -1.72
XRCC4-204ENST00000509268 PPP1R11O60927 126 aaPredicted RBP4.33□□□□□ -1.72
XRCC4-204ENST00000509268 CYP7B1O75881 506 aa4.33□□□□□ -1.72
XRCC4-204ENST00000509268 CD3EP07766 207 aa4.33□□□□□ -1.72
XRCC4-204ENST00000509268 PMS1P54277 932 aaKnown RBP4.33□□□□□ -1.72
XRCC4-204ENST00000509268 FBXL19Q6PCT2 694 aa4.33□□□□□ -1.72
XRCC4-204ENST00000509268 DCP2Q8IU60 420 aaKnown RBP4.33□□□□□ -1.72
XRCC4-204ENST00000509268 KBTBD2Q8IY47 623 aa4.33□□□□□ -1.72
XRCC4-204ENST00000509268 NAF1Q96HR8 494 aaKnown RBP4.33□□□□□ -1.72
XRCC4-204ENST00000509268 L2HGDHQ9H9P8 463 aa4.33□□□□□ -1.72
XRCC4-204ENST00000509268 IL13P35225 146 aa4.32□□□□□ -1.72
XRCC4-204ENST00000509268 ZNF165P49910 485 aa4.32□□□□□ -1.72
XRCC4-204ENST00000509268 CLCQ05315 142 aa4.32□□□□□ -1.72
XRCC4-204ENST00000509268 FAM26EQ8N5C1 309 aa4.32□□□□□ -1.72
XRCC4-204ENST00000509268 BRF1Q92994 677 aa4.32□□□□□ -1.72
XRCC4-204ENST00000509268 SYT3Q9BQG1 590 aa4.32□□□□□ -1.72
XRCC4-204ENST00000509268 AP5M1Q9H0R1 490 aa4.32□□□□□ -1.72
XRCC4-204ENST00000509268 TRBV23OR9-2A0A075B6M9 112 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 A0A087X1B8 175 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 NARSO43776 548 aaKnown RBP4.31□□□□□ -1.72
XRCC4-204ENST00000509268 CD247P20963 164 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 TMC4Q7Z404 712 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 STK32CQ86UX6 486 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 KLHL36Q8N4N3 616 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 ZFR2Q9UPR6 939 aaKnown RBP4.31□□□□□ -1.72
XRCC4-204ENST00000509268 AURKAO14965 403 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 B4GALT4O60513 344 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 NTRK1P04629 796 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 ITGA4P13612 1032 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 EIF4A3P38919 411 aaKnown RBP4.31□□□□□ -1.72
XRCC4-204ENST00000509268 NRN1LQ496H8 165 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 LRCH2Q5VUJ6 765 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 GK5Q6ZS86 529 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 FAM126BQ8IXS8 530 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 CRAMP1Q96RY5 1269 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 SEC61A2Q9H9S3 476 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 GULP1Q9UBP9 304 aa4.31□□□□□ -1.72
XRCC4-204ENST00000509268 NPHS1O60500 1241 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 XPCQ01831 940 aaPredicted RBP4.3□□□□□ -1.72
XRCC4-204ENST00000509268 ADAM9Q13443 819 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 SEC14L1Q92503 715 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 ZG16BQ96DA0 208 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 PTPN18Q99952 460 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 CSRNP2Q9H175 543 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 MEGF9Q9H1U4 602 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 DLL4Q9NR61 685 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 KBTBD4Q9NVX7 518 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 SIT1Q9Y3P8 196 aa4.3□□□□□ -1.72
XRCC4-204ENST00000509268 NKX3-2P78367 333 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 PTH1RQ03431 593 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 LSM12Q3MHD2 195 aaKnown RBP4.29□□□□□ -1.72
XRCC4-204ENST00000509268 AXDND1Q5T1B0 1012 aaPredicted RBP4.29□□□□□ -1.72
XRCC4-204ENST00000509268 DCAF15Q66K64 600 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 IGFL4Q6B9Z1 124 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 DPY19L2P1Q6NXN4 242 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 SCUBE1Q8IWY4 988 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 TAB3Q8N5C8 712 aaPredicted RBP4.29□□□□□ -1.72
XRCC4-204ENST00000509268 EDAQ92838 391 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 VOPP1Q96AW1 172 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 ZDHHC15Q96MV8 337 aa4.29□□□□□ -1.72
XRCC4-204ENST00000509268 NOL6Q9H6R4 1146 aaKnown RBP4.29□□□□□ -1.72
XRCC4-204ENST00000509268 BARX1Q9HBU1 254 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms