RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 LGI4Q8N135 537 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 LINC00482Q8N8I6 264 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 FERD3LQ96RJ6 166 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 PCED1AQ9H1Q7 454 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 ING1Q9UK53 422 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 PPT2Q9UMR5 302 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 PCDHGB7Q9Y5F8 929 aa4.03□□□□□ -1.76
DEPDC1B-204ENST00000509006 MROH6A6NGR9 719 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 TBC1D8O95759 1140 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 CYP2C8P10632 490 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 ITGA4P13612 1032 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 THBS2P35442 1172 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 POU4F1Q01851 419 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 MCTP2Q6DN12 878 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 RCSD1Q6JBY9 416 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 BORAQ6PGQ7 559 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 PALM2Q8IXS6 379 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 BACH2Q9BYV9 841 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 NOL6Q9H6R4 1146 aaKnown RBP4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 METTL5Q9NRN9 209 aaKnown RBP4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 FAM86C1Q9NVL1 165 aa4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 SF3B6Q9Y3B4 125 aaKnown RBP4.02□□□□□ -1.77
DEPDC1B-204ENST00000509006 AMHP03971 560 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 RPL13P26373 211 aaKnown RBP4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 KIAA2012Q0VF49 1180 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 TRIM26Q12899 539 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 FAM26FQ5R3K3 315 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 USP51Q70EK9 711 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 LZTR1Q8N653 840 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 NETO2Q8NC67 525 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 PEX11GQ96HA9 241 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 ZDHHC15Q96MV8 337 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 HAUS7Q99871 368 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 C11orf84Q9BUA3 381 aaPredicted RBP4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 KLC2Q9H0B6 622 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 KLHL25Q9H0H3 589 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 PPP4R1LQ9P1A2 415 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 DDX41Q9UJV9 622 aaKnown RBP4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 NUDT5Q9UKK9 219 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 SIT1Q9Y3P8 196 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 HS3ST3A1Q9Y663 406 aa4.01□□□□□ -1.77
DEPDC1B-204ENST00000509006 AURKAO14965 403 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 PPP1R11O60927 126 aaPredicted RBP4□□□□□ -1.77
DEPDC1B-204ENST00000509006 SLC9A5Q14940 896 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 EEF1DP3Q658K8 133 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 ZNF585AQ6P3V2 769 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 STK32CQ86UX6 486 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 FAM124AQ86V42 546 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 TXNDC5Q8NBS9 432 aaKnown RBP4□□□□□ -1.77
DEPDC1B-204ENST00000509006 RGS22Q8NE09 1264 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 MTA3Q9BTC8 594 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 CD248Q9HCU0 757 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 WHRNQ9P202 907 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 GULP1Q9UBP9 304 aa4□□□□□ -1.77
DEPDC1B-204ENST00000509006 DIS3Q9Y2L1 958 aaKnown RBP4□□□□□ -1.77
DEPDC1B-204ENST00000509006 LAMTOR5O43504 91 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 B4GALT3O60512 393 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 TGM1P22735 817 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 SOX9P48436 509 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 COL9A2Q14055 689 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 TCEAL1Q15170 157 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 WWC2Q6AWC2 1192 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 CCDC81Q6ZN84 652 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 FAM26EQ8N5C1 309 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 ZNF513Q8N8E2 541 aaPredicted RBP3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 KYQ8NBH2 561 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 KLHL6Q8WZ60 621 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 BCL11AQ9H165 835 aa3.99□□□□□ -1.77
DEPDC1B-204ENST00000509006 STXBP3O00186 592 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 DDX3XO00571 662 aaKnown RBP eCLIP3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 GPR42O15529 346 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 VAMP4O75379 141 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 ZBTB7AO95365 584 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 EPHX1P07099 455 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 GIPRP48546 466 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 PPP2R5DQ14738 602 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 PRR31Q5SQ13 230 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 FBXW10Q5XX13 1052 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 NPM2Q86SE8 214 aaKnown RBP3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 CPNE8Q86YQ8 564 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 ARHGEF39Q8N4T4 335 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 C19orf47Q8N9M1 422 aaKnown RBP3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 ADCY4Q8NFM4 1077 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 CDK5RAP1Q96SZ6 601 aaKnown RBP3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 GINM1Q9NU53 330 aa3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 CGGBP1Q9UFW8 167 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1B-204ENST00000509006 A0A1W2PQH9 124 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 NTRK1P04629 796 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 ITGA1P56199 1179 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 PAK2Q13177 524 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 GRB10Q13322 594 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 SPDYAQ5MJ70 313 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 HEATR6Q6AI08 1181 aaKnown RBP3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 ETV3LQ6ZN32 361 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 RASGRP4Q8TDF6 673 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 IGDCC4Q8TDY8 1250 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 RNF34Q969K3 372 aa3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 RCC1LQ96I51 464 aaKnown RBP3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 LCORQ96JN0 433 aaPredicted RBP3.97□□□□□ -1.77
DEPDC1B-204ENST00000509006 PHAXQ9H814 394 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms