RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 CNTNAP5Q8WYK1 1306 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 ESYT2A0FGR8 921 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 FARP2O94887 1054 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 CPA1P15085 419 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 TAL1P17542 331 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 CALML3P27482 149 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 CDC27P30260 824 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 GJA9P57773 515 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 DUSP28Q4G0W2 176 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 C1orf53Q5VUE5 145 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 SLC30A10Q6XR72 485 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 RNF180Q86T96 592 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 HOMER1Q86YM7 354 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 KLHDC9Q8NEP7 349 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 PSTPIP2Q9H939 334 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 SH3GLB2Q9NR46 395 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 BARHL2Q9NY43 387 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 GNEQ9Y223 722 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 LRRC37A2A6NM11 1700 aa12.22□□□□□ -0.45
POLR2J3-213ENST00000508848 MEIS2O14770 477 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 CFBP00751 764 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 FOSP01100 380 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 NR3C2P08235 984 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 RXRAP19793 462 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 TNFAIP2Q03169 654 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 PDE4DQ08499 809 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 STXBP2Q15833 593 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 PFKFB3Q16875 520 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 CCSAPQ6IQ19 270 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 CPLX2Q6PUV4 134 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 PCSK9Q8NBP7 692 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 SCFD2Q8WU76 684 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 CCDC12Q8WUD4 166 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 CUL5Q93034 780 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 TAAR1Q96RJ0 339 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 PDCD2LQ9BRP1 358 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 UPF3BQ9BZI7 483 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 SPC25Q9HBM1 224 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 PXMP2Q9NR77 195 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 COL20A1Q9P218 1284 aa12.21□□□□□ -0.45
POLR2J3-213ENST00000508848 MYH7BA7E2Y1 1941 aa12.21□□□□□ -0.46
POLR2J3-213ENST00000508848 MOXD2PA6NHM9 499 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 MAFGO15525 162 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 PFKFB2O60825 505 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 ADAMTS4O75173 837 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 MYCP01106 439 aaPredicted RBP12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 SCG2P13521 617 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 LRRC41Q15345 812 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 ARHGEF16Q5VV41 709 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 PAWRQ96IZ0 340 aaKnown RBP12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 ZMYND12Q9H0C1 365 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 UPF2Q9HAU5 1272 aaKnown RBP12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 RIC8AQ9NPQ8 531 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 XPNPEP3Q9NQH7 507 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 PHF24Q9UPV7 400 aa12.2□□□□□ -0.46
POLR2J3-213ENST00000508848 ELP1O95163 1332 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 KPNA6O60684 536 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 CABYRO75952 493 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 CDKL5O76039 1030 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 NEK4P51957 841 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 PKN1Q16512 942 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 GALNT17Q6IS24 598 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 TRIM22Q8IYM9 498 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 CMTR1Q8N1G2 835 aaKnown RBP12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 EMID1Q96A84 441 aaPredicted RBP12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 KIF2CQ99661 725 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 C22orf23Q9BZE7 217 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 WDR11Q9BZH6 1224 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 C11orf49Q9H6J7 331 aa12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 ZHX1Q9UKY1 873 aaPredicted RBP12.19□□□□□ -0.46
POLR2J3-213ENST00000508848 KBTBD13C9JR72 458 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 CTAGE5O15320 804 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 DEXIO95424 95 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 GNA11P29992 359 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 ICAM3P32942 547 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 AKAP17AQ02040 695 aaKnown RBP12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 AP3B2Q13367 1082 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 TTLL4Q14679 1199 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 SNX17Q15036 470 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 PGM5Q15124 567 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 PCNX4Q63HM2 1172 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 CCDC82Q8N4S0 544 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 SENP7Q9BQF6 1050 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
POLR2J3-213ENST00000508848 SYNRGQ9UMZ2 1314 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 A6NJR5 290 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 STXBP3O00186 592 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 CPLX1O14810 134 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 ZEB2O60315 1214 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 SMPD1P17405 629 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 CCND2P30279 289 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 ADCYAP1R1P41586 468 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 CLK2P49760 499 aaKnown RBP12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 AK2P54819 239 aa12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 BRDTQ58F21 947 aaPredicted RBP12.17□□□□□ -0.46
POLR2J3-213ENST00000508848 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms