RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 SCLT1Q96NL6 688 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 EPAS1Q99814 870 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 GORASP1Q9BQQ3 440 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.79□□□□□ -1.322e-6■■■■□ 25.8
KDM3B-204ENST00000507996 KCNMB3Q9NPA1 279 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 PAPOLBQ9NRJ5 636 aaKnown RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 POLLQ9UGP5 575 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 KLRG2A4D1S0 409 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 CFAP73A6NFT4 308 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 ENO4A6NNW6 628 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 HMGB1P1B2RPK0 211 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 B4DLN1 442 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 BUB1BO60566 1050 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 IFT88Q13099 833 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 COL9A3Q14050 684 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 LBRQ14739 615 aaKnown RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 E2F5Q15329 346 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 TTF1Q15361 905 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 DOK7Q18PE1 504 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 DPY19L2Q6NUT2 758 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 CNGA4Q8IV77 575 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 EHBP1Q8NDI1 1231 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 TBC1D16Q8TBP0 767 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 CCT6BQ92526 530 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 FAM163AQ96GL9 167 aaPredicted RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 MMS19Q96T76 1030 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 ZC3H12CQ9C0D7 883 aaKnown RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 NDST4Q9H3R1 872 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 CENPHQ9H3R5 247 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 NOP53Q9NZM5 478 aaKnown RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 LEMD3Q9Y2U8 911 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 ATP6V0A2Q9Y487 856 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 A0A0U1RQJ8 604 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 HSF2BPO75031 334 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 ATP2B4P23634 1241 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 CNGA1P29973 690 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 PEX19P40855 299 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 MAP3K12Q12852 859 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 BYSLQ13895 437 aaKnown RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 CC2D2BQ6DHV5 1058 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 SP8Q8IXZ3 490 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 FBXL16Q8N461 479 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 PDILTQ8N807 584 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 TRIML1Q8N9V2 468 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 MIGA1Q8NAN2 632 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 ATRIPQ8WXE1 791 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 OSBP2Q969R2 916 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 ARL8AQ96BM9 186 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 STAMBPL1Q96FJ0 436 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 RBM41Q96IZ5 413 aaKnown RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 MTFR1LQ9H019 292 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 PUS7LQ9H0K6 701 aaKnown RBP6.79□□□□□ -1.32
KDM3B-204ENST00000507996 ZFATQ9P243 1243 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 DACH1Q9UI36 760 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 MROH7-TTC4A0A0A0MT08 1334 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 ZMYM6O95789 1325 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 ZNF532Q9HCE3 1301 aa6.79□□□□□ -1.32
KDM3B-204ENST00000507996 MYH8P13535 1937 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 M0R2C6 588 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 SPTLC2O15270 562 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 PPP6R2O75170 966 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 DPEP1P16444 411 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 ATP4AP20648 1035 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 ZNF268Q14587 947 aaPredicted RBP6.78□□□□□ -1.32
KDM3B-204ENST00000507996 SKIDA1Q1XH10 827 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 SPECC1Q5M775 1068 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 ZNF804AQ7Z570 1209 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 IQCKQ8N0W5 287 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 MLKLQ8NB16 471 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 DENND2AQ9ULE3 1009 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 ZNF232Q9UNY5 417 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 SLC12A4Q9UP95 1085 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 SAR1BQ9Y6B6 198 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 LRP5O75197 1615 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 PTPDC1A2A3K4 754 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 ANP32DO95626 131 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 TFRCP02786 760 aaKnown RBP6.78□□□□□ -1.32
KDM3B-204ENST00000507996 RPSAP08865 295 aaKnown RBP6.78□□□□□ -1.32
KDM3B-204ENST00000507996 NR1D1P20393 614 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 CEBPZQ03701 1054 aaKnown RBP6.78□□□□□ -1.32
KDM3B-204ENST00000507996 ITGB3BPQ13352 177 aaPredicted RBP6.78□□□□□ -1.32
KDM3B-204ENST00000507996 CCDC181Q5TID7 509 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 CCDC70Q6NSX1 233 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 TSHZ1Q6ZSZ6 1077 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 FBXO33Q7Z6M2 555 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 KIRREL3Q8IZU9 778 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 TSC22D3Q99576 134 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 TSGA10Q9BZW7 698 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 CACNA1SQ13698 1873 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 ANKRD31Q8N7Z5 1873 aa6.78□□□□□ -1.32
KDM3B-204ENST00000507996 F8W031 263 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-204ENST00000507996 STXBP3O00186 592 aa6.77□□□□□ -1.33
KDM3B-204ENST00000507996 TRAPPC3O43617 180 aa6.77□□□□□ -1.33
KDM3B-204ENST00000507996 PENKP01210 267 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-204ENST00000507996 PDE6AP16499 860 aa6.77□□□□□ -1.33
KDM3B-204ENST00000507996 ERCC5P28715 1186 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-204ENST00000507996 MDM2Q00987 491 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-204ENST00000507996 MYO1EQ12965 1108 aa6.77□□□□□ -1.33
KDM3B-204ENST00000507996 DYNC1I2Q13409 638 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms