RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 MOGSQ13724 837 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 C8orf34Q49A92 452 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 PERM1Q5SV97 790 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 MAP3K21Q5TCX8 1036 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 GPAT2Q6NUI2 795 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 SLC39A5Q6ZMH5 540 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 WFDC8Q8IUA0 241 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 TRIB2Q92519 343 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 TRIM11Q96F44 468 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 PRRX2Q99811 253 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 LPIN3Q9BQK8 851 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 NKX2-4Q9H2Z4 354 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 TUT1Q9H6E5 874 aaKnown RBP7.03□□□□□ -1.28
VEGFC-201ENST00000507638 PDLIM7Q9NR12 457 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 MSRAQ9UJ68 235 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 NAGPAQ9UK23 515 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 GJD2Q9UKL4 321 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 ATRNL1Q5VV63 1379 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 ACACBO00763 2458 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 COL4A1P02462 1669 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 COL4A6Q14031 1691 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 CHD9Q3L8U1 2897 aa7.02□□□□□ -1.28
VEGFC-201ENST00000507638 AOX1Q06278 1338 aa7.02□□□□□ -1.28
VEGFC-201ENST00000507638 ZBTB42B2RXF5 422 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 RFXAPO00287 272 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 CCND3P30281 292 aaPredicted RBP7.02□□□□□ -1.29
VEGFC-201ENST00000507638 PPATQ06203 517 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 RALBP1Q15311 655 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 SF3B3Q15393 1217 aaKnown RBP7.02□□□□□ -1.29
VEGFC-201ENST00000507638 CFAP100Q494V2 611 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 GLIPR1L2Q4G1C9 344 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 ATCAYQ86WG3 371 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 UBE2Q2Q8WVN8 375 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 PLD4Q96BZ4 506 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 TEPSINQ96N21 525 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 SLC28A3Q9HAS3 691 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 BSDC1Q9NW68 430 aaPredicted RBP7.02□□□□□ -1.29
VEGFC-201ENST00000507638 POLIQ9UNA4 740 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 MTCH2Q9Y6C9 303 aa7.02□□□□□ -1.29
VEGFC-201ENST00000507638 ANKRD11Q6UB99 2663 aaPredicted RBP7.02□□□□□ -1.29
VEGFC-201ENST00000507638 SH3TC1Q8TE82 1336 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 RLFQ13129 1914 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 MAP1BP46821 2468 aaKnown RBP7.01□□□□□ -1.29
VEGFC-201ENST00000507638 GBF1Q92538 1859 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 EDN3P14138 238 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 CYP2B6P20813 491 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 CES1P23141 567 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 NRG1Q02297 640 aaPredicted RBP7.01□□□□□ -1.29
VEGFC-201ENST00000507638 FPGSQ05932 587 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 CACNB2Q08289 660 aaPredicted RBP7.01□□□□□ -1.29
VEGFC-201ENST00000507638 ZNF211Q13398 564 aaPredicted RBP7.01□□□□□ -1.29
VEGFC-201ENST00000507638 COL9A3Q14050 684 aaPredicted RBP7.01□□□□□ -1.29
VEGFC-201ENST00000507638 TRIM60Q495X7 471 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 KRT40Q6A162 431 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 NLRP10Q86W26 655 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 NCAPG2Q86XI2 1143 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 WRNIP1Q96S55 665 aa7.01□□□□□ -1.29
VEGFC-201ENST00000507638 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.01□□□□□ -1.29
VEGFC-201ENST00000507638 SMG9Q9H0W8 520 aaKnown RBP7.01□□□□□ -1.29
VEGFC-201ENST00000507638 CARNS1A5YM72 827 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 PRR23AA6NEV1 266 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 F8W031 263 aaPredicted RBP7□□□□□ -1.29
VEGFC-201ENST00000507638 FZD6O60353 706 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 RAG1P15918 1043 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 COL8A1P27658 744 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 RBM5P52756 815 aaKnown RBP eCLIP7□□□□□ -1.29
VEGFC-201ENST00000507638 MTMR3Q13615 1198 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 ANKRD13CQ8N6S4 541 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 NUDT8Q8WV74 236 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 RMDN1Q96DB5 314 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 NSUN5Q96P11 429 aaKnown RBP7□□□□□ -1.29
VEGFC-201ENST00000507638 BACH2Q9BYV9 841 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 TMEM39BQ9GZU3 492 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 SH2B1Q9NRF2 756 aaPredicted RBP7□□□□□ -1.29
VEGFC-201ENST00000507638 A0A0G2JMZ2 1700 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 NCOR2Q9Y618 2525 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 CHD7Q9P2D1 2997 aa7□□□□□ -1.29
VEGFC-201ENST00000507638 BRWD1Q9NSI6 2320 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 SOWAHDA6NJG2 315 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 TCP10L2B9ZVM9 353 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 C9orf172C9J069 976 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 PROB1E7EW31 1015 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 H0Y858 1186 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 MSTNO14793 375 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 PHACTR2O75167 634 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 POU3F3P20264 500 aaPredicted RBP6.99□□□□□ -1.29
VEGFC-201ENST00000507638 SERPINB4P48594 390 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 TNFAIP1Q13829 316 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 SUZ12Q15022 739 aaKnown RBP6.99□□□□□ -1.29
VEGFC-201ENST00000507638 RAB30Q15771 203 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 PLA2G4EQ3MJ16 856 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 DMRTB1Q96MA1 342 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 COA1Q9GZY4 146 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 IRF2BPLQ9H1B7 796 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 SUV39H2Q9H5I1 410 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 SEC31BQ9NQW1 1179 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 TLR9Q9NR96 1032 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 TMEM63CQ9P1W3 806 aa6.99□□□□□ -1.29
VEGFC-201ENST00000507638 ZNF70Q9UC06 446 aaPredicted RBP6.99□□□□□ -1.29
VEGFC-201ENST00000507638 YBX2Q9Y2T7 364 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms