RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 TNKSO95271 1327 aa15.76■□□□□ 0.11
POLR2J3-212ENST00000507355 NFIBO00712 420 aa15.76■□□□□ 0.11
POLR2J3-212ENST00000507355 ARHGEF15O94989 841 aa15.76■□□□□ 0.11
POLR2J3-212ENST00000507355 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
POLR2J3-212ENST00000507355 MFSD6Q6ZSS7 791 aa15.76■□□□□ 0.11
POLR2J3-212ENST00000507355 TTC14Q96N46 770 aa15.76■□□□□ 0.11
POLR2J3-212ENST00000507355 ADD3Q9UEY8 706 aaKnown RBP15.76■□□□□ 0.11
POLR2J3-212ENST00000507355 COL4A4P53420 1690 aaPredicted RBP15.76■□□□□ 0.11
POLR2J3-212ENST00000507355 BRWD1Q9NSI6 2320 aa15.76■□□□□ 0.11
POLR2J3-212ENST00000507355 ZMYM6O95789 1325 aa15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 CCDC171Q6TFL3 1326 aa15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 LCTP09848 1927 aa15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 PTPDC1A2A3K4 754 aa15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 PFKMP08237 780 aa15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 PDHBP11177 359 aa15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 ACTN1P12814 892 aa15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 ALDH5A1P51649 535 aaPredicted RBP15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 PPP1R13LQ8WUF5 828 aa15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 KHSRPQ92945 711 aaKnown RBP eCLIP15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 COG5Q9UP83 839 aa15.75■□□□□ 0.11
POLR2J3-212ENST00000507355 TANC1Q9C0D5 1861 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 TLL1O43897 1013 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 MYL3P08590 195 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 SUPT20HL2P0C7V6 817 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 SDSP20132 328 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 POU3F3P20264 500 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 CALML3P27482 149 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 TAP1Q03518 808 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 ZNF543Q08ER8 600 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 DUSP28Q4G0W2 176 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 FAM47CQ5HY64 1035 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 SMC5Q8IY18 1101 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 CLEC4DQ8WXI8 215 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 HLA-CQ95604 372 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 SLC9A7Q96T83 725 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 WDR11Q9BZH6 1224 aa15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-212ENST00000507355 PCP11498 1178 aaKnown RBP15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 MFAP1P55081 439 aaKnown RBP15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 RNF207Q6ZRF8 634 aa15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 TBC1D10CQ8IV04 446 aa15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 HERC6Q8IVU3 1022 aa15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 ZKSCAN3Q9BRR0 538 aa15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 FTOQ9C0B1 505 aaKnown RBP eCLIP15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 ARIH1Q9Y4X5 557 aaPredicted RBP15.73■□□□□ 0.11
POLR2J3-212ENST00000507355 LOC102724159A0A0B4J2E5 919 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 RBM47A0AV96 593 aaKnown RBP15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 ZNF213O14771 459 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 IGHDP01880 384 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 SNHG28P0DPA3 235 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 PURAQ00577 322 aaKnown RBP15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 GRB10Q13322 594 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 AAMPQ13685 434 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 PWP2Q15269 919 aaKnown RBP15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 SLC30A10Q6XR72 485 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 CHD1LQ86WJ1 897 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 ESR2Q92731 530 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 UBA5Q9GZZ9 404 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 RNF41Q9H4P4 317 aaPredicted RBP15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 C11orf16Q9NQ32 467 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 POLR3EQ9NVU0 708 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 PNMA2Q9UL42 364 aa15.72■□□□□ 0.11
POLR2J3-212ENST00000507355 KIF28PB7ZC32 967 aa15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 GOLGA8HP0CJ92 632 aa15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 RPS6P62753 249 aaKnown RBP15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 PDE4DQ08499 809 aa15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 CWC27Q6UX04 472 aaKnown RBP15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 DGKHQ86XP1 1220 aa15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 OR6J1Q8NGC5 347 aa15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 PHOSPHO2Q8TCD6 241 aa15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 GDPD5Q8WTR4 605 aa15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 MTG1Q9BT17 334 aaPredicted RBP15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 CPVLQ9H3G5 476 aa15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 OSBPL3Q9H4L5 887 aa15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 GPHNQ9NQX3 736 aaPredicted RBP15.71■□□□□ 0.11
POLR2J3-212ENST00000507355 NEDD4P46934 1319 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 WDR19Q8NEZ3 1342 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 PTPRSQ13332 1948 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 TET1Q8NFU7 2136 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 RFC2P35250 354 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 CPT1AP50416 773 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 CHMP4BP1P59074 171 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 NUCB1Q02818 461 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 NBPF20Q3BBV1 942 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 USH1GQ495M9 461 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 GPATCH4Q5T3I0 446 aaKnown RBP15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 TMCO2Q7Z6W1 182 aaPredicted RBP15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 RETREG2Q8NC44 543 aa15.7■□□□□ 0.1
POLR2J3-212ENST00000507355 SCN10AQ9Y5Y9 1956 aa15.69■□□□□ 0.1
POLR2J3-212ENST00000507355 LCHNA4D1U4 455 aa15.69■□□□□ 0.1
POLR2J3-212ENST00000507355 LPXNO60711 386 aa15.69■□□□□ 0.1
POLR2J3-212ENST00000507355 GPR37L1O60883 481 aa15.69■□□□□ 0.1
POLR2J3-212ENST00000507355 KDM4AO75164 1064 aa15.69■□□□□ 0.1
POLR2J3-212ENST00000507355 IQCF3P0C7M6 154 aa15.69■□□□□ 0.1
POLR2J3-212ENST00000507355 CCDC178Q5BJE1 867 aa15.69■□□□□ 0.1
POLR2J3-212ENST00000507355 DNERQ8NFT8 737 aa15.69■□□□□ 0.1
POLR2J3-212ENST00000507355 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
POLR2J3-212ENST00000507355 MPHOSPH6Q99547 160 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms