RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 BFSP2Q13515 415 aa19.43■□□□□ 0.7
SNF8-205ENST00000507302 TMEM31Q5JXX7 168 aa19.43■□□□□ 0.7
SNF8-205ENST00000507302 TTBK2Q6IQ55 1244 aa19.43■□□□□ 0.7
SNF8-205ENST00000507302 SLC30A10Q6XR72 485 aa19.43■□□□□ 0.7
SNF8-205ENST00000507302 DNERQ8NFT8 737 aa19.43■□□□□ 0.7
SNF8-205ENST00000507302 SCFD2Q8WU76 684 aa19.43■□□□□ 0.7
SNF8-205ENST00000507302 GPHNQ9NQX3 736 aaPredicted RBP19.43■□□□□ 0.7
SNF8-205ENST00000507302 PNMA2Q9UL42 364 aa19.43■□□□□ 0.7
SNF8-205ENST00000507302 ISY1Q9ULR0 285 aaKnown RBP19.43■□□□□ 0.7
SNF8-205ENST00000507302 HCN4Q9Y3Q4 1203 aa19.43■□□□□ 0.7
SNF8-205ENST00000507302 PI4K2BG5E9Z4 385 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 PPP2R5BQ15173 497 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 BRDTQ58F21 947 aaPredicted RBP19.42■□□□□ 0.7
SNF8-205ENST00000507302 SYDE2Q5VT97 1194 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 RETREG2Q8NC44 543 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 CAGE1Q8TC20 777 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 AFAP1L1Q8TED9 768 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 CHMP4CQ96CF2 233 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 MAF1Q9H063 256 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 TCP11L1Q9NUJ3 509 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 KIAA1217Q5T5P2 1943 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 WDR19Q8NEZ3 1342 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 RAD50Q92878 1312 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 MUC6Q6W4X9 2439 aa19.42■□□□□ 0.7
SNF8-205ENST00000507302 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.41■□□□□ 0.7
SNF8-205ENST00000507302 CXCL10P02778 98 aa19.41■□□□□ 0.7
SNF8-205ENST00000507302 SLC16A2P36021 539 aa19.41■□□□□ 0.7
SNF8-205ENST00000507302 WDR5P61964 334 aaKnown RBP19.41■□□□□ 0.7
SNF8-205ENST00000507302 CTDSPL2Q05D32 466 aa19.41■□□□□ 0.7
SNF8-205ENST00000507302 FAM47CQ5HY64 1035 aa19.41■□□□□ 0.7
SNF8-205ENST00000507302 C20orf194Q5TEA3 1177 aa19.41■□□□□ 0.7
SNF8-205ENST00000507302 CCDC62Q6P9F0 684 aa19.41■□□□□ 0.7
SNF8-205ENST00000507302 CD320Q9NPF0 282 aa19.41■□□□□ 0.7
SNF8-205ENST00000507302 LCHNA4D1U4 455 aa19.4■□□□□ 0.7
SNF8-205ENST00000507302 SNHG28P0DPA3 235 aa19.4■□□□□ 0.7
SNF8-205ENST00000507302 RPS6P62753 249 aaKnown RBP19.4■□□□□ 0.7
SNF8-205ENST00000507302 ALX1Q15699 326 aa19.4■□□□□ 0.7
SNF8-205ENST00000507302 RNF207Q6ZRF8 634 aa19.4■□□□□ 0.7
SNF8-205ENST00000507302 RGS22Q8NE09 1264 aa19.4■□□□□ 0.7
SNF8-205ENST00000507302 COPS5Q92905 334 aa19.4■□□□□ 0.7
SNF8-205ENST00000507302 FTOQ9C0B1 505 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNF8-205ENST00000507302 PTPDC1A2A3K4 754 aa19.39■□□□□ 0.69
SNF8-205ENST00000507302 ARIH2O95376 493 aa19.39■□□□□ 0.69
SNF8-205ENST00000507302 PARNO95453 639 aaKnown RBP19.39■□□□□ 0.69
SNF8-205ENST00000507302 TOP1P11387 765 aaKnown RBP19.39■□□□□ 0.69
SNF8-205ENST00000507302 PDE4DQ08499 809 aa19.39■□□□□ 0.69
SNF8-205ENST00000507302 CCDC96Q2M329 555 aa19.39■□□□□ 0.69
SNF8-205ENST00000507302 PPP1R13LQ8WUF5 828 aa19.39■□□□□ 0.69
SNF8-205ENST00000507302 DHX38Q92620 1227 aaKnown RBP19.39■□□□□ 0.69
SNF8-205ENST00000507302 KAT2BQ92831 832 aa19.39■□□□□ 0.69
SNF8-205ENST00000507302 TMEM47Q9BQJ4 181 aa19.39■□□□□ 0.69
SNF8-205ENST00000507302 TXNP10599 105 aaKnown RBP19.38■□□□□ 0.69
SNF8-205ENST00000507302 PDHBP11177 359 aa19.38■□□□□ 0.69
SNF8-205ENST00000507302 ERVK-21P61565 698 aa19.38■□□□□ 0.69
SNF8-205ENST00000507302 PTGISQ16647 500 aa19.38■□□□□ 0.69
SNF8-205ENST00000507302 MPHOSPH6Q99547 160 aaKnown RBP19.38■□□□□ 0.69
SNF8-205ENST00000507302 SALL3Q9BXA9 1300 aa19.38■□□□□ 0.69
SNF8-205ENST00000507302 SUGCTQ9HAC7 445 aa19.38■□□□□ 0.69
SNF8-205ENST00000507302 RANBP6O60518 1105 aaKnown RBP19.37■□□□□ 0.69
SNF8-205ENST00000507302 GJB5O95377 273 aa19.37■□□□□ 0.69
SNF8-205ENST00000507302 SELPP16109 830 aa19.37■□□□□ 0.69
SNF8-205ENST00000507302 CALML3P27482 149 aa19.37■□□□□ 0.69
SNF8-205ENST00000507302 KCNJ6P48051 423 aa19.37■□□□□ 0.69
SNF8-205ENST00000507302 MKRN4PQ13434 485 aaPredicted RBP19.37■□□□□ 0.69
SNF8-205ENST00000507302 VPS53Q5VIR6 699 aa19.37■□□□□ 0.69
SNF8-205ENST00000507302 GDF6Q6KF10 455 aaPredicted RBP19.37■□□□□ 0.69
SNF8-205ENST00000507302 CNKSR3Q6P9H4 555 aa19.37■□□□□ 0.69
SNF8-205ENST00000507302 CCDC155Q8N6L0 562 aa19.37■□□□□ 0.69
SNF8-205ENST00000507302 FSD1Q9BTV5 496 aa19.37■□□□□ 0.69
SNF8-205ENST00000507302 RCAN3Q9UKA8 241 aa19.37■□□□□ 0.69
SNF8-205ENST00000507302 NBNO60934 754 aa19.36■□□□□ 0.69
SNF8-205ENST00000507302 MMP3P08254 477 aa19.36■□□□□ 0.69
SNF8-205ENST00000507302 DEFB103AP81534 67 aa19.36■□□□□ 0.69
SNF8-205ENST00000507302 ARHGAP1Q07960 439 aa19.36■□□□□ 0.69
SNF8-205ENST00000507302 ZNF543Q08ER8 600 aa19.36■□□□□ 0.69
SNF8-205ENST00000507302 TCTN1Q2MV58 587 aa19.36■□□□□ 0.69
SNF8-205ENST00000507302 TRAF7Q6Q0C0 670 aa19.36■□□□□ 0.69
SNF8-205ENST00000507302 LRRC8DQ7L1W4 858 aa19.36■□□□□ 0.69
SNF8-205ENST00000507302 RAD9AQ99638 391 aa19.36■□□□□ 0.69
SNF8-205ENST00000507302 ZMYM6O95789 1325 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 FRMPD2Q68DX3 1309 aaPredicted RBP19.35■□□□□ 0.69
SNF8-205ENST00000507302 ABHD14A-ACY1A0A1B0GW23 586 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 B4DLN1 442 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 MRPL12P52815 198 aaKnown RBP19.35■□□□□ 0.69
SNF8-205ENST00000507302 LEXMQ3ZCV2 418 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 TMCO2Q7Z6W1 182 aaPredicted RBP19.35■□□□□ 0.69
SNF8-205ENST00000507302 FAM178BQ8IXR5 827 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 MIER1Q8N108 512 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 OTUD7AQ8TE49 926 aaPredicted RBP19.35■□□□□ 0.69
SNF8-205ENST00000507302 GDPD5Q8WTR4 605 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 EMID1Q96A84 441 aaPredicted RBP19.35■□□□□ 0.69
SNF8-205ENST00000507302 TTC14Q96N46 770 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 UBE2ZQ9H832 354 aaPredicted RBP19.35■□□□□ 0.69
SNF8-205ENST00000507302 GPCPD1Q9NPB8 672 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 GTF2IRD1Q9UHL9 959 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 NOD1Q9Y239 953 aa19.35■□□□□ 0.69
SNF8-205ENST00000507302 MICAL3Q7RTP6 2002 aa19.34■□□□□ 0.69
SNF8-205ENST00000507302 LINC01553A4QN01 128 aa19.34■□□□□ 0.69
SNF8-205ENST00000507302 EFCAB14O75071 495 aa19.34■□□□□ 0.69
SNF8-205ENST00000507302 CKBP12277 381 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms