RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
RNF4-208ENST00000507247 TBCKQ8TEA7 893 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 CHAMP1Q96JM3 812 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 ARHGAP39Q9C0H5 1083 aa16.21■□□□□ 0.19
RNF4-208ENST00000507247 ASTN1O14525 1302 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 FRMPD4Q14CM0 1322 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 RPTORQ8N122 1335 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 MCM3APO60318 1980 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 FOSP01100 380 aaPredicted RBP16.2■□□□□ 0.18
RNF4-208ENST00000507247 PGK2P07205 417 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 ADORA2AP29274 412 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 TOB1P50616 345 aaPredicted RBP16.2■□□□□ 0.18
RNF4-208ENST00000507247 UBXN2AP68543 259 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 GRB14Q14449 540 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 FOXD4L6Q3SYB3 417 aaPredicted RBP16.2■□□□□ 0.18
RNF4-208ENST00000507247 FOXD4L3Q6VB84 417 aaPredicted RBP16.2■□□□□ 0.18
RNF4-208ENST00000507247 ABRAQ8N0Z2 381 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 FAM133AQ8N9E0 248 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 CRYGNQ8WXF5 182 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 FGD4Q96M96 766 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 IVNS1ABPQ9Y6Y0 642 aa16.2■□□□□ 0.18
RNF4-208ENST00000507247 CASP8AP2Q9UKL3 1982 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 SOWAHBA6NEL2 793 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 GPR25O00155 361 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 STRNO43815 780 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 COBLO75128 1261 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 SREBF1P36956 1147 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 LACTBP83111 547 aaPredicted RBP16.19■□□□□ 0.18
RNF4-208ENST00000507247 SP3Q02447 781 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 NBR1Q14596 966 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 MORN1Q5T089 497 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 MCTP2Q6DN12 878 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 IL31RAQ8NI17 732 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 TNPO1Q92973 898 aaKnown RBP16.19■□□□□ 0.18
RNF4-208ENST00000507247 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
RNF4-208ENST00000507247 SLC15A5A6NIM6 579 aa16.18■□□□□ 0.18
RNF4-208ENST00000507247 ARHGAP4P98171 946 aa16.18■□□□□ 0.18
RNF4-208ENST00000507247 TRIM47Q96LD4 638 aa16.18■□□□□ 0.18
RNF4-208ENST00000507247 RMDN3Q96TC7 470 aa16.18■□□□□ 0.18
RNF4-208ENST00000507247 BEGAINQ9BUH8 593 aa16.18■□□□□ 0.18
RNF4-208ENST00000507247 FTOQ9C0B1 505 aaKnown RBP eCLIP16.18■□□□□ 0.18
RNF4-208ENST00000507247 DDX49Q9Y6V7 483 aaKnown RBP16.18■□□□□ 0.18
RNF4-208ENST00000507247 KIAA1217Q5T5P2 1943 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 TNPO2O14787 897 aaKnown RBP16.17■□□□□ 0.18
RNF4-208ENST00000507247 EIF2AK2P19525 551 aaKnown RBP16.17■□□□□ 0.18
RNF4-208ENST00000507247 ATP2B1P20020 1258 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 PSMC4P43686 418 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 ALDH5A1P51649 535 aaPredicted RBP16.17■□□□□ 0.18
RNF4-208ENST00000507247 FCGRTP55899 365 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 DNM1Q05193 864 aaKnown RBP16.17■□□□□ 0.18
RNF4-208ENST00000507247 PGM5Q15124 567 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 ZNF792Q3KQV3 632 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 NEK8Q86SG6 692 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 DNERQ8NFT8 737 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 CD99L2Q8TCZ2 262 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 PDCD2LQ9BRP1 358 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 EHMT1Q9H9B1 1298 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 GJD2Q9UKL4 321 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 NOL7Q9UMY1 257 aaKnown RBP16.17■□□□□ 0.18
RNF4-208ENST00000507247 PCDHB6Q9Y5E3 794 aa16.17■□□□□ 0.18
RNF4-208ENST00000507247 CYP3A4P08684 503 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 TRAPPC10P48553 1259 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 MAP2K5Q13163 448 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 LETM2Q2VYF4 491 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 RILPL1Q5EBL4 403 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 TTC38Q5R3I4 469 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 ARHGEF16Q5VV41 709 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 NPLOC4Q8TAT6 608 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 NSUN6Q8TEA1 469 aaKnown RBP16.16■□□□□ 0.18
RNF4-208ENST00000507247 USP6NLQ92738 828 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
RNF4-208ENST00000507247 USP28Q96RU2 1077 aa16.16■□□□□ 0.18
RNF4-208ENST00000507247 FKTNO75072 461 aa16.15■□□□□ 0.18
RNF4-208ENST00000507247 TDP2O95551 362 aa16.15■□□□□ 0.18
RNF4-208ENST00000507247 USP11P51784 963 aa16.15■□□□□ 0.18
RNF4-208ENST00000507247 MRPS9P82933 396 aaKnown RBP16.15■□□□□ 0.18
RNF4-208ENST00000507247 PCNX4Q63HM2 1172 aa16.15■□□□□ 0.18
RNF4-208ENST00000507247 ZNF296Q8WUU4 475 aaPredicted RBP16.15■□□□□ 0.18
RNF4-208ENST00000507247 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
RNF4-208ENST00000507247 TFIP11Q9UBB9 837 aaKnown RBP16.15■□□□□ 0.18
RNF4-208ENST00000507247 GABRQQ9UN88 632 aa16.15■□□□□ 0.18
RNF4-208ENST00000507247 ATP6V1DQ9Y5K8 247 aa16.15■□□□□ 0.18
RNF4-208ENST00000507247 CLIC4Q9Y696 253 aa16.15■□□□□ 0.18
RNF4-208ENST00000507247 CCNT1O60563 726 aaKnown RBP16.14■□□□□ 0.17
RNF4-208ENST00000507247 NR3C2P08235 984 aa16.14■□□□□ 0.17
RNF4-208ENST00000507247 MYCLP12524 364 aaPredicted RBP16.14■□□□□ 0.17
RNF4-208ENST00000507247 EDNRBP24530 442 aa16.14■□□□□ 0.17
RNF4-208ENST00000507247 CIITAP33076 1130 aa16.14■□□□□ 0.17
RNF4-208ENST00000507247 KIF22Q14807 665 aa16.14■□□□□ 0.17
RNF4-208ENST00000507247 ZNF174Q15697 407 aa16.14■□□□□ 0.17
RNF4-208ENST00000507247 DPP9Q86TI2 863 aa16.14■□□□□ 0.17
RNF4-208ENST00000507247 SOCS4Q8WXH5 440 aa16.14■□□□□ 0.17
RNF4-208ENST00000507247 ZNF396Q96N95 335 aaPredicted RBP16.14■□□□□ 0.17
RNF4-208ENST00000507247 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.14■□□□□ 0.17
RNF4-208ENST00000507247 ADD3Q9UEY8 706 aaKnown RBP16.14■□□□□ 0.17
RNF4-208ENST00000507247 FAM86B1E9PN63 330 aa16.13■□□□□ 0.17
RNF4-208ENST00000507247 SLC37A4O43826 429 aa16.13■□□□□ 0.17
RNF4-208ENST00000507247 HOXC6P09630 235 aa16.13■□□□□ 0.17
RNF4-208ENST00000507247 FAM86B2P0C5J1 330 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms