RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LHFPL2Q6ZUX7 228 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 TSPYL5Q86VY4 417 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 IGSF22Q8N9C0 903 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 LINC00116Q8NCU8 138 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 C7orf69Q9H7B7 122 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 CABP5Q9NP86 173 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 CLEC1BQ9P126 229 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 TMEFF2Q9UIK5 374 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 APOBEC2Q9Y235 224 aaKnown RBP4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 ZKSCAN5Q9Y2L8 839 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 SMARCA4P51532 1647 aa4.32□□□□□ -1.72
TRAPPC11-205ENST00000506426 ARID4BQ4LE39 1312 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 NPHP3-ACAD11A0A0J9YXS1 232 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 FAM170BA6NMN3 283 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 M0R2C6 588 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 CBX4O00257 560 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 ARNTLO00327 626 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 NEMP1O14524 444 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 GSTA4O15217 222 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 MYO1BO43795 1136 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 GAS7O60861 476 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 ADAMTS4O75173 837 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 F2P00734 622 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 SRGAP2CP0DJJ0 459 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 IL2P60568 153 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 TMPRSS15P98073 1019 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 MTMR1Q13613 665 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 NFE2Q16621 373 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 KIZQ2M2Z5 673 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 CDKAL1Q5VV42 579 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 ABHD17CQ6PCB6 329 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 ZNF765Q7L2R6 523 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 RAVER1Q8IY67 606 aaKnown RBP4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 NXPE1Q8N323 547 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 FBXL6Q8N531 539 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 USHBP1Q8N6Y0 703 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 PCDH19Q8TAB3 1148 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 MTMR8Q96EF0 704 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 C8orf48Q96LL4 319 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 MMP19Q99542 508 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 CHMP4AQ9BY43 222 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 PCGF6Q9BYE7 350 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 ASPSCR1Q9BZE9 553 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 MKNK2Q9HBH9 465 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 TCFL5Q9UL49 500 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 SPEF1Q9Y4P9 236 aa4.31□□□□□ -1.72
TRAPPC11-205ENST00000506426 CUX2O14529 1486 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 ZNF891A8MT65 544 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 PAX4O43316 350 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 MSCO60682 206 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 GLRX3O76003 335 aaKnown RBP4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 FKBP9O95302 570 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 TBC1D8O95759 1140 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 LCP1P13796 627 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 TAL1P17542 331 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 TPP2P29144 1249 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 NEK2P51955 445 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 OXCT1P55809 520 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 ST5P78524 1137 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 OCRLQ01968 901 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 DSG1Q02413 1049 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 MCL1Q07820 350 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 FAPQ12884 760 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 PPP2R5AQ15172 486 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 FAM47CQ5HY64 1035 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 RTP2Q5QGT7 225 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 RNF43Q68DV7 783 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 RNF111Q6ZNA4 994 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 FKBP9P1Q75LS8 142 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 THAP5Q7Z6K1 395 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 C11orf74Q86VG3 221 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 PASD1Q8IV76 773 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 CCDC103Q8IW40 242 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 RCBTB1Q8NDN9 531 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 PANK1Q8TE04 598 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 UBE2FQ969M7 185 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 FBXW5Q969U6 566 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 RELTQ969Z4 430 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 MFSD14AQ96MC6 490 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 PTCHD1Q96NR3 888 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 FMNL2Q96PY5 1086 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 POLR3GLQ9BT43 218 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 CELF4Q9BZC1 486 aaKnown RBP4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 FOXP3Q9BZS1 431 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 CCDC8Q9H0W5 538 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 ZSWIM5Q9P217 1185 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 COQ6Q9Y2Z9 468 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 PCDHA2Q9Y5H9 948 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 OAS3Q9Y6K5 1087 aaKnown RBP4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 SMARCA2P51531 1590 aa4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 BAZ1BQ9UIG0 1483 aaKnown RBP4.3□□□□□ -1.72
TRAPPC11-205ENST00000506426 WDR64B1ANS9 1081 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 FAM47E-STBD1D6RA91 191 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 TRAF5O00463 557 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 FGF10O15520 208 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 TSPAN6O43657 245 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 PRC1O43663 620 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 SOD2P04179 222 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 F13BP05160 661 aa4.29□□□□□ -1.72
TRAPPC11-205ENST00000506426 CKMP06732 381 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms