RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
SIL1-208ENST00000505945 SLC28A3Q9HAS3 691 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 DIAPH3Q9NSV4 1193 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 ZSWIM5Q9P217 1185 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 SLC4A7Q9Y6M7 1214 aa13.32□□□□□ -0.28
SIL1-208ENST00000505945 SPTBN5Q9NRC6 3674 aaKnown RBP13.32□□□□□ -0.28
SIL1-208ENST00000505945 A6NJR5 290 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 ZBBXA8MT70 800 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 B4DLN1 442 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 NKRFO15226 690 aaKnown RBP eCLIP13.31□□□□□ -0.28
SIL1-208ENST00000505945 ARIH2O95376 493 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 MYOGP15173 224 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 IGFBP4P22692 258 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 MRPL12P52815 198 aaKnown RBP13.31□□□□□ -0.28
SIL1-208ENST00000505945 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 TTLL4Q14679 1199 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 CDC37Q16543 378 aaPredicted RBP13.31□□□□□ -0.28
SIL1-208ENST00000505945 BRDTQ58F21 947 aaPredicted RBP13.31□□□□□ -0.28
SIL1-208ENST00000505945 ADGRF4Q8IZF3 695 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 RGS22Q8NE09 1264 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 ANKS1AQ92625 1134 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
SIL1-208ENST00000505945 TAAR1Q96RJ0 339 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 ZSCAN10Q96SZ4 725 aaPredicted RBP13.31□□□□□ -0.28
SIL1-208ENST00000505945 KAT14Q9H8E8 782 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 VAT1LQ9HCJ6 419 aa13.31□□□□□ -0.28
SIL1-208ENST00000505945 GBF1Q92538 1859 aa13.3□□□□□ -0.28
SIL1-208ENST00000505945 KPNA6O60684 536 aa13.3□□□□□ -0.28
SIL1-208ENST00000505945 CCDC85BQ15834 202 aaPredicted RBP13.3□□□□□ -0.28
SIL1-208ENST00000505945 CCDC178Q5BJE1 867 aa13.3□□□□□ -0.28
SIL1-208ENST00000505945 NFRKBQ6P4R8 1299 aa13.3□□□□□ -0.28
SIL1-208ENST00000505945 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
SIL1-208ENST00000505945 EXOC6Q8TAG9 804 aa13.3□□□□□ -0.28
SIL1-208ENST00000505945 SYMPKQ92797 1274 aaKnown RBP13.3□□□□□ -0.28
SIL1-208ENST00000505945 COL20A1Q9P218 1284 aa13.3□□□□□ -0.28
SIL1-208ENST00000505945 RAD50Q92878 1312 aa13.3□□□□□ -0.28
SIL1-208ENST00000505945 SCN10AQ9Y5Y9 1956 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
SIL1-208ENST00000505945 ATP2A2P16615 1042 aaKnown RBP13.29□□□□□ -0.28
SIL1-208ENST00000505945 IMMTQ16891 758 aaKnown RBP13.29□□□□□ -0.28
SIL1-208ENST00000505945 LY6KQ17RY6 165 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 QRICH1Q2TAL8 776 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 ASPRV1Q53RT3 343 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 TJAP1Q5JTD0 557 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 CCDC62Q6P9F0 684 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 SEPT14Q6ZU15 432 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 SYTL5Q8TDW5 730 aaPredicted RBP13.29□□□□□ -0.28
SIL1-208ENST00000505945 NSUN6Q8TEA1 469 aaKnown RBP13.29□□□□□ -0.28
SIL1-208ENST00000505945 AFG1LQ8WV93 481 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 DSCC1Q9BVC3 393 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 ABCB11O95342 1321 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 SCN5AQ14524 2016 aa13.29□□□□□ -0.28
SIL1-208ENST00000505945 CHD7Q9P2D1 2997 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 HIP1O00291 1037 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 PFKMP08237 780 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 PARP1P09874 1014 aaKnown RBP13.28□□□□□ -0.28
SIL1-208ENST00000505945 IQCF3P0C7M6 154 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 NT5C2P49902 561 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 CHST3Q7LGC8 479 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 MCF2L2Q86YR7 1114 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 RETREG2Q8NC44 543 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 RMDN3Q96TC7 470 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 JMJD4Q9H9V9 463 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 CTNNA3Q9UI47 895 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 NOD1Q9Y239 953 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 PCDHA11Q9Y5I1 949 aa13.28□□□□□ -0.28
SIL1-208ENST00000505945 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 GH1P01241 217 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 EIF2AK2P19525 551 aaKnown RBP13.27□□□□□ -0.29
SIL1-208ENST00000505945 PTPN11Q06124 597 aaPredicted RBP13.27□□□□□ -0.29
SIL1-208ENST00000505945 ARHGAP1Q07960 439 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 STXBP2Q15833 593 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 STAG2Q8N3U4 1231 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 IWS1Q96ST2 819 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 UBAC1Q9BSL1 405 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 KRT23Q9C075 422 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 FTOQ9C0B1 505 aaKnown RBP eCLIP13.27□□□□□ -0.29
SIL1-208ENST00000505945 MAF1Q9H063 256 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 IL25Q9H293 177 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 MRPL11Q9Y3B7 192 aaKnown RBP13.27□□□□□ -0.29
SIL1-208ENST00000505945 LAMA4Q16363 1823 aa13.27□□□□□ -0.29
SIL1-208ENST00000505945 CFBP00751 764 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 MMP3P08254 477 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 ACTN1P12814 892 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 RFC2P35250 354 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 BFSP2Q13515 415 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 PTGISQ16647 500 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 TMEM67Q5HYA8 995 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 IFIT1BQ5T764 474 aaKnown RBP13.26□□□□□ -0.29
SIL1-208ENST00000505945 ARHGEF16Q5VV41 709 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 ATXN2LQ8WWM7 1075 aaKnown RBP13.26□□□□□ -0.29
SIL1-208ENST00000505945 CNNM2Q9H8M5 875 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 THEGQ9P2T0 379 aa13.26□□□□□ -0.29
SIL1-208ENST00000505945 NCOR1O75376 2440 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 TET1Q8NFU7 2136 aa13.25□□□□□ -0.29
SIL1-208ENST00000505945 TRIP12Q14669 1992 aaPredicted RBP13.25□□□□□ -0.29
SIL1-208ENST00000505945 MYH6P13533 1939 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms