RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 FAM193BQ96PV7 902 aaPredicted RBP8.11□□□□□ -1.11
CDH9-202ENST00000505020 KCNK17Q96T54 332 aa8.11□□□□□ -1.11
CDH9-202ENST00000505020 TBCBQ99426 244 aa8.11□□□□□ -1.11
CDH9-202ENST00000505020 NUCKS1Q9H1E3 243 aaKnown RBP8.11□□□□□ -1.11
CDH9-202ENST00000505020 ZWILCHQ9H900 591 aa8.11□□□□□ -1.11
CDH9-202ENST00000505020 GGA3Q9NZ52 723 aa8.11□□□□□ -1.11
CDH9-202ENST00000505020 CDC23Q9UJX2 597 aa8.11□□□□□ -1.11
CDH9-202ENST00000505020 KNSTRNQ9Y448 316 aa8.11□□□□□ -1.11
CDH9-202ENST00000505020 SYNJ2BP-COX16A0A087WUM0 186 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 KLHL41O60662 606 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 APOA4P06727 396 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 TPM3P06753 285 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 ATP1A3P13637 1013 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 JUNDP17535 347 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 RECQLP46063 649 aaPredicted RBP8.1□□□□□ -1.11
CDH9-202ENST00000505020 PMS1P54277 932 aaKnown RBP8.1□□□□□ -1.11
CDH9-202ENST00000505020 TNFAIP2Q03169 654 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 GRM2Q14416 872 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 TNIP1Q15025 636 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 RASA2Q15283 850 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 PCBP2Q15366 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDH9-202ENST00000505020 SLC27A3Q5K4L6 730 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 EP400NLQ6ZTU2 488 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 SYDE1Q6ZW31 735 aaPredicted RBP8.1□□□□□ -1.11
CDH9-202ENST00000505020 BEND5Q7L4P6 421 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 PCYOX1LQ8NBM8 494 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 C3orf58Q8NDZ4 430 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 UIMC1Q96RL1 719 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 KIAA1683Q9H0B3 1180 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 KCTD10Q9H3F6 313 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 GRPEL1Q9HAV7 217 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 ARFGAP3Q9NP61 516 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 NSMCE4AQ9NXX6 385 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 DACT1Q9NYF0 836 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 CCDC39Q9UFE4 941 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 DAGLAQ9Y4D2 1042 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 SQORQ9Y6N5 450 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 ABCC9O60706 1549 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 LINC00854A0A1B0GVQ3 168 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 H7C0S8 307 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 EIF3FO00303 357 aaPredicted RBP8.1□□□□□ -1.11
CDH9-202ENST00000505020 MAFO75444 373 aaPredicted RBP8.1□□□□□ -1.11
CDH9-202ENST00000505020 MYBP10242 640 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 GRIK1P39086 918 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 MCM2P49736 904 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 SLC12A2P55011 1212 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 ZNF252P-AS1Q0IIN9 211 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 SCARB2Q14108 478 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 SPARCL1Q14515 664 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 ACAP1Q15027 740 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 PROX2Q3B8N5 592 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 C11orf91Q3C1V1 193 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 RABL6Q3YEC7 729 aaPredicted RBP8.1□□□□□ -1.11
CDH9-202ENST00000505020 B3GNT9Q6UX72 402 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 RUFY4Q6ZNE9 571 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 CCDC144CPQ8IYA2 1237 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 USP7Q93009 1102 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 SMOC1Q9H4F8 434 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 EFCC1Q9HA90 598 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 TRPV4Q9HBA0 871 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 CRTAC1Q9NQ79 661 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 EVA1BQ9NVM1 165 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 ZNHIT6Q9NWK9 470 aaKnown RBP8.1□□□□□ -1.11
CDH9-202ENST00000505020 EIF2B4Q9UI10 523 aaKnown RBP8.1□□□□□ -1.11
CDH9-202ENST00000505020 LAMP5Q9UJQ1 280 aa8.1□□□□□ -1.11
CDH9-202ENST00000505020 ATAD2BQ9ULI0 1458 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 FYB1O15117 783 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 CTNND1O60716 968 aaKnown RBP8.09□□□□□ -1.11
CDH9-202ENST00000505020 PQBP1O60828 265 aaKnown RBP8.09□□□□□ -1.11
CDH9-202ENST00000505020 E2F6O75461 281 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 TGDSO95455 350 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 NPTXRO95502 500 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 TBC1D8O95759 1140 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 APBA3O96018 575 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 NEK4P51957 841 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 RAB15P59190 212 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 BTKQ06187 659 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 CDC16Q13042 620 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 TAF7Q15545 349 aaPredicted RBP8.09□□□□□ -1.11
CDH9-202ENST00000505020 ANKRD39Q53RE8 183 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 FAM209AQ5JX71 171 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 TBC1D21Q8IYX1 336 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 C17orf50Q8WW18 174 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 HSPBAP1Q96EW2 488 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 NEK1Q96PY6 1258 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 ALG1Q9BT22 464 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 UBN1Q9NPG3 1134 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 ITM2CQ9NQX7 267 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 PAPOLBQ9NRJ5 636 aaKnown RBP8.09□□□□□ -1.11
CDH9-202ENST00000505020 PLSCR4Q9NRQ2 329 aa8.09□□□□□ -1.11
CDH9-202ENST00000505020 KLHL33A6NCF5 533 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 HOXC11O43248 304 aaPredicted RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 DNAJC8O75937 253 aaPredicted RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 KIF20AO95235 890 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 MMEP08473 750 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 THEGLP0DJG4 465 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 PYGMP11217 842 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 RLBP1P12271 317 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 GZMAP12544 262 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 HOXC12P31275 282 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms