RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 MCM2P49736 904 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 CPT1AP50416 773 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 NKX3-2P78367 333 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 CNTN2Q02246 1040 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 AP3B2Q13367 1082 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 LHX8Q68G74 356 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 NOL8Q76FK4 1167 aaKnown RBP11.33□□□□□ -0.6
NR1I3-220ENST00000505005 SRBD1Q8N5C6 995 aaKnown RBP11.33□□□□□ -0.6
NR1I3-220ENST00000505005 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
NR1I3-220ENST00000505005 ZSCAN31Q96LW9 406 aaPredicted RBP11.33□□□□□ -0.6
NR1I3-220ENST00000505005 LRRC2Q9BYS8 371 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 SLKQ9H2G2 1235 aaPredicted RBP11.33□□□□□ -0.6
NR1I3-220ENST00000505005 C6orf50Q9HD87 102 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 RBM47A0AV96 593 aaKnown RBP11.32□□□□□ -0.6
NR1I3-220ENST00000505005 ESYT2A0FGR8 921 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 SOWAHBA6NEL2 793 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 DEXIO95424 95 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 PDIA3P30101 505 aaKnown RBP11.32□□□□□ -0.6
NR1I3-220ENST00000505005 NAPAP54920 295 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 GJA9P57773 515 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 SNAP25P60880 206 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
NR1I3-220ENST00000505005 APOBRQ0VD83 1088 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 CCDC144BQ3MJ40 725 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 DUSP28Q4G0W2 176 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 C1orf53Q5VUE5 145 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 NLRX1Q86UT6 975 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 TNPO1Q92973 898 aaKnown RBP11.32□□□□□ -0.6
NR1I3-220ENST00000505005 GLT1D1Q96MS3 346 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
NR1I3-220ENST00000505005 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 BARHL2Q9NY43 387 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 KIF3AQ9Y496 699 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
NR1I3-220ENST00000505005 ELP1O95163 1332 aa11.32□□□□□ -0.6
NR1I3-220ENST00000505005 NR3C2P08235 984 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 SCG2P13521 617 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 RBM25P49756 843 aaKnown RBP11.31□□□□□ -0.6
NR1I3-220ENST00000505005 NEK4P51957 841 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 RABEP1Q15276 862 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 PFKFB3Q16875 520 aaPredicted RBP11.31□□□□□ -0.6
NR1I3-220ENST00000505005 HEATR3Q7Z4Q2 680 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 VSIG10LQ86VR7 867 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 DPF3Q92784 378 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 PAWRQ96IZ0 340 aaKnown RBP11.31□□□□□ -0.6
NR1I3-220ENST00000505005 MYL10Q9BUA6 226 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 WDR11Q9BZH6 1224 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 CPVLQ9H3G5 476 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 SENP2Q9HC62 589 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 PXMP2Q9NR77 195 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 SH2B1Q9NRF2 756 aaPredicted RBP11.31□□□□□ -0.6
NR1I3-220ENST00000505005 PRKAG2Q9UGJ0 569 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 BRPF3Q9ULD4 1205 aa11.31□□□□□ -0.6
NR1I3-220ENST00000505005 BAZ2BQ9UIF8 2168 aaKnown RBP11.3□□□□□ -0.6
NR1I3-220ENST00000505005 EVI5O60447 810 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 ADCY7P51828 1080 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 TRIM32Q13049 653 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 NEDD9Q14511 834 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 CCDC82Q8N4S0 544 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 PDCD2LQ9BRP1 358 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 UPF3AQ9H1J1 476 aaKnown RBP11.3□□□□□ -0.6
NR1I3-220ENST00000505005 BRMS1Q9HCU9 246 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 RIC8AQ9NPQ8 531 aa11.3□□□□□ -0.6
NR1I3-220ENST00000505005 SMCO2A6NFE2 343 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 PFKFB2O60825 505 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 GH1P01241 217 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 C6orf222P0C671 652 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-220ENST00000505005 TXNP10599 105 aaKnown RBP11.29□□□□□ -0.6
NR1I3-220ENST00000505005 RXRAP19793 462 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 ADD1P35611 737 aaKnown RBP11.29□□□□□ -0.6
NR1I3-220ENST00000505005 TOB2Q14106 344 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-220ENST00000505005 PGM5Q15124 567 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 LRRC41Q15345 812 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 PRAMEF19Q5SWL8 479 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 PCNX4Q63HM2 1172 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 UBE2Q1Q7Z7E8 422 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 TLK2Q86UE8 772 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 SHISA4Q96DD7 197 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 TCEANC2Q96MN5 208 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 TAAR1Q96RJ0 339 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 NAP1L4Q99733 375 aaKnown RBP11.29□□□□□ -0.6
NR1I3-220ENST00000505005 SENP7Q9BQF6 1050 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
NR1I3-220ENST00000505005 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 LIMCH1Q9UPQ0 1083 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 PHF24Q9UPV7 400 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 SMCHD1A6NHR9 2005 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
NR1I3-220ENST00000505005 TLR3O15455 904 aaKnown RBP11.28□□□□□ -0.6
NR1I3-220ENST00000505005 FIBPO43427 364 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 COL6A1P12109 1028 aa11.28□□□□□ -0.6
NR1I3-220ENST00000505005 ICAM3P32942 547 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms