RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 NFIBO00712 420 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 MS4A1P11836 297 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 RFC2P35250 354 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 SLC16A2P36021 539 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 PPARAQ07869 468 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 PPP2R5BQ15173 497 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 BRDTQ58F21 947 aaPredicted RBP8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 TTBK2Q6IQ55 1244 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 RCSD1Q6JBY9 416 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 PHOSPHO2Q8TCD6 241 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 RAD50Q92878 1312 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 COPS5Q92905 334 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 GPATCH3Q96I76 525 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 UIMC1Q96RL1 719 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 CRBNQ96SW2 442 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 C11orf16Q9NQ32 467 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 ZBTB40Q9NUA8 1239 aa8.16□□□□□ -1.1
NPIPB3-203ENST00000504841 ICAM1P05362 532 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 ZFYP08048 801 aaPredicted RBP8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 POU3F3P20264 500 aaPredicted RBP8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 SSTR3P32745 418 aaPredicted RBP8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 DEFB103AP81534 67 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 CTDSPL2Q05D32 466 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 PDE4DQ08499 809 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 BFSP2Q13515 415 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 PTGISQ16647 500 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 FAM117BQ6P1L5 589 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 ALYREFQ86V81 257 aaKnown RBP8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 MORC4Q8TE76 937 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 KIF12Q96FN5 646 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 SEC62Q99442 399 aaKnown RBP8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 GPCPD1Q9NPB8 672 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 CD320Q9NPF0 282 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 INCENPQ9NQS7 918 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 TOMM22Q9NS69 142 aa8.15□□□□□ -1.1
NPIPB3-203ENST00000504841 PATL2C9JE40 543 aaKnown RBP8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 RANBP6O60518 1105 aaKnown RBP8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 LPXNO60711 386 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 PLA2G6O60733 806 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 BAIAP3O94812 1187 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 KCNA5P22460 613 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 WDR5P61964 334 aaKnown RBP8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 PPP4R3BQ5MIZ7 849 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 SYDE2Q5VT97 1194 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 NFRKBQ6P4R8 1299 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 RNF207Q6ZRF8 634 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 LRRC8DQ7L1W4 858 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 CCDC155Q8N6L0 562 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 FSD1Q9BTV5 496 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 RANBP17Q9H2T7 1088 aaKnown RBP8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 UBE2ZQ9H832 354 aaPredicted RBP8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 ARIH1Q9Y4X5 557 aaPredicted RBP8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 TET1Q8NFU7 2136 aa8.14□□□□□ -1.11
NPIPB3-203ENST00000504841 SCN10AQ9Y5Y9 1956 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 PTPRSQ13332 1948 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 RBM47A0AV96 593 aaKnown RBP8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 PI4K2BG5E9Z4 385 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 KPNA6O60684 536 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 GPR37L1O60883 481 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 TXNP10599 105 aaKnown RBP8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 IL9P15248 144 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 LRRFIP1Q32MZ4 808 aaKnown RBP8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 RRP12Q5JTH9 1297 aaKnown RBP8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 GDF6Q6KF10 455 aaPredicted RBP8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 EP400NLQ6ZTU2 488 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 CHST3Q7LGC8 479 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 GJD3Q8N144 294 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 AFAP1L1Q8TED9 768 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 SCFD2Q8WU76 684 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 DCAF4Q8WV16 495 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 AFG1LQ8WV93 481 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 TGS1Q96RS0 853 aaKnown RBP8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 MPHOSPH6Q99547 160 aaKnown RBP8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 CHMP4BQ9H444 224 aaKnown RBP8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 SUGCTQ9HAC7 445 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 IL17RBQ9NRM6 502 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 MUC3AQ02505 3323 aa8.13□□□□□ -1.11
NPIPB3-203ENST00000504841 LINC01553A4QN01 128 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 NKRFO15226 690 aaKnown RBP eCLIP8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 MAP3K13O43283 966 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 ARIH2O95376 493 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 MMP3P08254 477 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 PYGBP11216 843 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 CHRM1P11229 460 aaPredicted RBP8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 SELPP16109 830 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 RPS6P62753 249 aaKnown RBP8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 PTPN11Q06124 597 aaPredicted RBP8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 CSPP1Q1MSJ5 1256 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 TCTN1Q2MV58 587 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 USH1GQ495M9 461 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 CNKSR3Q6P9H4 555 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 SEPT14Q6ZU15 432 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 CAGE1Q8TC20 777 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 CLEC4DQ8WXI8 215 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 DHX38Q92620 1227 aaKnown RBP8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 ALG1Q9BT22 464 aa8.12□□□□□ -1.11
NPIPB3-203ENST00000504841 LOC102724159A0A0B4J2E5 919 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 A6NJR5 290 aa8.11□□□□□ -1.11
NPIPB3-203ENST00000504841 PRR33A8MZF0 331 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms