RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 TFCP2L1Q9NZI6 479 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 ANKIB1Q9P2G1 1089 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 DLEC1Q9Y238 1755 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 ATXN7O15265 892 aaPredicted RBP10.04□□□□□ -0.8
CASC9-201ENST00000504531 GRIN3BO60391 1043 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 DTNBO60941 627 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 TNNT1P13805 278 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 MX2P20592 715 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 HMGB2P26583 209 aaKnown RBP10.04□□□□□ -0.8
CASC9-201ENST00000504531 ERCC5P28715 1186 aaPredicted RBP10.04□□□□□ -0.8
CASC9-201ENST00000504531 TDO2P48775 406 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 CCDC144BQ3MJ40 725 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 TMEM164Q5U3C3 297 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 CCDC144CPQ8IYA2 1237 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 ALDH16A1Q8IZ83 802 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 ENOX1Q8TC92 643 aaKnown RBP10.04□□□□□ -0.8
CASC9-201ENST00000504531 ANKS1AQ92625 1134 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 FERMT2Q96AC1 680 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 SYTL4Q96C24 671 aaPredicted RBP10.04□□□□□ -0.8
CASC9-201ENST00000504531 RIOK1Q9BRS2 568 aaKnown RBP10.04□□□□□ -0.8
CASC9-201ENST00000504531 CCDC94Q9BW85 323 aaPredicted RBP10.04□□□□□ -0.8
CASC9-201ENST00000504531 ARMT1Q9H993 441 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 ATP8A2Q9NTI2 1148 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 AATFQ9NY61 560 aaKnown RBP eCLIP10.04□□□□□ -0.8
CASC9-201ENST00000504531 LRP2BPQ9P2M1 347 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 NRBP1Q9UHY1 535 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 KCNH3Q9ULD8 1083 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 NIP7Q9Y221 180 aaKnown RBP eCLIP10.04□□□□□ -0.8
CASC9-201ENST00000504531 KIAA1551Q9HCM1 1747 aa10.04□□□□□ -0.8
CASC9-201ENST00000504531 A0A1B0GUL6 1792 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 MYH14Q7Z406 1995 aaKnown RBP10.03□□□□□ -0.8
CASC9-201ENST00000504531 GOLGA6L9A6NEM1 432 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 CYP7A1P22680 504 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 PTPN14Q15678 1187 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 TPD52L1Q16890 204 aaPredicted RBP10.03□□□□□ -0.8
CASC9-201ENST00000504531 DPCR1Q3MIW9 517 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 SPTY2D1Q68D10 685 aaPredicted RBP10.03□□□□□ -0.8
CASC9-201ENST00000504531 OTUD7BQ6GQQ9 843 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 MICU3Q86XE3 530 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 IQCA1Q86XH1 822 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 ZNF654Q8IZM8 581 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 CCAR2Q8N163 923 aaKnown RBP10.03□□□□□ -0.8
CASC9-201ENST00000504531 ZNF526Q8TF50 670 aaPredicted RBP10.03□□□□□ -0.8
CASC9-201ENST00000504531 UBAC1Q9BSL1 405 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 SLC26A6Q9BXS9 759 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 TMX1Q9H3N1 280 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 NDFIP2Q9NV92 336 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 FBXO2Q9UK22 296 aaPredicted RBP10.03□□□□□ -0.8
CASC9-201ENST00000504531 ECM29Q5VYK3 1845 aa10.03□□□□□ -0.8
CASC9-201ENST00000504531 FAM181BA6NEQ2 426 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 BNIP3LO60238 219 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 LGR5O75473 907 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 SMC2O95347 1197 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 FAM157BP0CG42 384 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 SLURP2P0DP57 97 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 SFPQP23246 707 aaKnown RBP eCLIP10.02□□□□□ -0.81
CASC9-201ENST00000504531 HOXA7P31268 230 aaPredicted RBP10.02□□□□□ -0.81
CASC9-201ENST00000504531 TOB1P50616 345 aaPredicted RBP10.02□□□□□ -0.81
CASC9-201ENST00000504531 KCNQ4P56696 695 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 FANCCQ00597 558 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 AKAP17AQ02040 695 aaKnown RBP10.02□□□□□ -0.81
CASC9-201ENST00000504531 LRMPQ12912 555 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 ITPK1Q13572 414 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 ZNF827Q17R98 1081 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 CEP135Q66GS9 1140 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 C15orf52Q6ZUT6 534 aaKnown RBP10.02□□□□□ -0.81
CASC9-201ENST00000504531 CATIPQ7Z7H3 387 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 DIS3L2Q8IYB7 885 aaKnown RBP10.02□□□□□ -0.81
CASC9-201ENST00000504531 LCORLQ8N3X6 602 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 CNNM3Q8NE01 707 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 KIF18AQ8NI77 898 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 C7orf43Q8WVR3 580 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 SRRTQ9BXP5 876 aaKnown RBP10.02□□□□□ -0.81
CASC9-201ENST00000504531 GTPBP4Q9BZE4 634 aaKnown RBP10.02□□□□□ -0.81
CASC9-201ENST00000504531 BRMS1Q9HCU9 246 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 SEC31BQ9NQW1 1179 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 SH3GLB2Q9NR46 395 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 CACNA1SQ13698 1873 aa10.02□□□□□ -0.81
CASC9-201ENST00000504531 RPS6KA4O75676 772 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 MAP2K3P46734 347 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 FAM193AP78312 1265 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 MORC3Q14149 939 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 GALNT17Q6IS24 598 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 METTL16Q86W50 562 aaKnown RBP10.01□□□□□ -0.81
CASC9-201ENST00000504531 STK11IPQ8N1F8 1099 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 NLGN2Q8NFZ4 835 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 CLP1Q92989 425 aaKnown RBP10.01□□□□□ -0.81
CASC9-201ENST00000504531 PHKBQ93100 1093 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 ABHD17AQ96GS6 310 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 GSDMAQ96QA5 445 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 PHF20Q9BVI0 1012 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 XPO4Q9C0E2 1151 aaKnown RBP10.01□□□□□ -0.81
CASC9-201ENST00000504531 L2HGDHQ9H9P8 463 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 LRRC4BQ9NT99 713 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 CGNQ9P2M7 1197 aaKnown RBP10.01□□□□□ -0.81
CASC9-201ENST00000504531 NARFQ9UHQ1 456 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 MINPP1Q9UNW1 487 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.01□□□□□ -0.81
CASC9-201ENST00000504531 SCN7AQ01118 1682 aa10.01□□□□□ -0.81
CASC9-201ENST00000504531 COL24A1Q17RW2 1714 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms